| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1549 |
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| Symbol | |
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| ID | 4569134 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1758925 |
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| End bp | 1761396 |
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| Gene Length | 2472 bp |
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| Protein Length | 823 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639766131 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_911995 |
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| Protein GI | 119357351 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.11093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAG ATAATAACAA ACGTGAAGCT CTTTCTGGTT CTCCGGTCAT AATGAATGCC
GAACAGGTTT ATGCAATAAG CCGCCAACAA CTGCAGCTTT TTATGTCGGC AACTCATGCG
GGCATATGGG AGTGGGATAC GGTTACAAAC AGCGTCATCT GGTCAGATGA AGTGTGGGCG
CTCTATGGAC TGAACGCTTC TTGCTGCGAT GCGACGTTCG AGGCATGGCT GAGTTCAGTT
CATCCTGAGG ATAGAGAAAA AACCGAGAAA ACTGTTTTGG GGGCCGCCAG AGACGATGTT
GCATTTGAAG TAGCCTGGAG AAGCCGTGAT CTTGACGGCA ATGAGCGCTG GCTTATGTCC
AAAGGTTTTC CGTTAAGGGA TGGCGCAGGA CGCACCGGGA GATATGTCGG TATCGTTCTG
GATATTACCG ATCGCAAGCA GGCTGAAGAT GCGCTGTGTG AGAGCGAAGA TCGTTTCAGA
AAACTTTTTG AAAGCCTTTC TGAAATCAAG CTGATTATCG ACTCCCATTC AGGCAAAATT
ATTGACGCCA ATCAGGCTGC GGTGGATTTT TATGGCTGGT CGATTGAAGA GCTGACATCG
ATGAATATTG AGCAAATCAA TACGACTTCA TCTGAATTGG TGACTCTGGA TACTGAGAAA
TGCGGATCAT TGCATCAGTC ATGCGTTTCA TTTCGTCATC GGAGGGCGGA TGGTTCAATC
CGTGATGTGG AGGTATTCAG CAATAATATT GAAATTGCCG GAAATATACT GTATTATTCC
ACTATTCATG ATGTTACCGA GAGAAAACGA TTCGAAGCCC TGACAGCATT TCGCCTTCGT
CTTCTCGATA TGGCTGAAAA CCGCTCGGTT GAAGAGTTGC TTAAAGCCAC TCTCGATGAA
TCCGAATGCA TGACCGAAAG CTCATTCAGC TTCTGCTGTT TTCTCATGGA TGAACGTTCT
TCACCAACTT TGCAGGTGTT ATCAACCAGT ACGGAAAAGG CTATGAGCCT GATGAACAGG
AATCAGGAAG TTTTTTCTCA ATTGAGTGAA AGTTCGATAT GGAGCGCGGC CATTCTTGAA
AAAAAAGCCG TGATTCACAA TGATGTCGAG AGAGATCTGC CCGAAGATCA CCCCTTCTTC
AAGCGTAAAC TGGTGGTTCC TATTGTGCAG GGTGATACGG TAATGGCTAT TATCGGGGTT
GGAAACAAAC AGTATCCCTA TGATGAGGAT GATGCCCGAT GGGTTGGAAC TCTTGCTGAT
GTCGCATGGG ATATCGTTGC TCGCAAGCGT GCCGAATTGT CTGAAAAGAA CACGCAGGAG
GCTTTGAGCC AGTCACAAAA GATGGAAATG GTTGGACGGC TTGCCGGTGG TATAGCCCAC
GATTTCAACA ATATGCTTGG GGTGATTCTC GGGCATACGG AAATAGCTCT TGAACAGCTT
GATCCTTCCG AATCGGCTTA TGCGGATCTT GAAGCAATTC GAAAAGCCGC AGCACGTTCG
GCGGGCTTGA TCCGTCAACT GCTTGCTTTT GCAAGAAAGC AGACCGTGAT GCCGAAAATT
ATTTCGTTGA ATACGATGGT TGAAGGGATG CTCACCATGA TGCGGCGCTT GATTGGTGAA
AATATTACCC TTGTCTGGAT ACCTGAAAAT CAGAATGCCA AGATCAAGAT CGATCCATCA
CAGATCGATC AGATACTTGC CAACCTTTGT GTCAATGCTC GTGACTCTAT TGTCGGAGGA
GGGAGAATTA CCATTGAAAC CGGCAGGCTG TGCGTGCAGA GAAACGAAAA CACAGCCAAC
CATCCATGCA GGATACCCGG AGACTATGTG ACGCTTGCGG TTACCGATAA TGGCAGCGGG
ATCGACAAGA AGCATCTCCC GCATATTTTC GAGCCGTTTT TTACCACCAA GGAACAAGGG
AAAGGGACGG GTCTCGGGTT ATCTACGGTT TATGGTATTG TCAAACAGAA TAACGGTTGT
ATTGACTGTC AGAGTGAGCC TGGTAAAGGG ACATGCATCA AAATTCACTT GCCGAGGTAT
ATCGATAAAG CCGATTCGGT ACCGGTAGAG ACGCCCGAGC AGAGTATTAC AAGAGGGAAG
GAGACGATAC TCCTTGTTGA AGATGAACCT GATATTCTTA AACTTTGCAA GCTGATGCTT
GAGAATAATG GTTATACGGT ACTTTCAGCC GATACTCCAA ATGAGGCTAT TCGGATAGCA
GCAAAACACA AGGGCGGGAT AGGATTGCTT TTAACGGATG TGGTTATGCC TGAAATGAAT
GGCTGCGATC TTTCGAACAA GCTCCGCATT ACCAGTCCGA ATCTTAAAAC CCTGTTCATG
TCGGGATATA CAGCTGATAT TATATCCCGT CACGGAGTAC TCGATGACGG TGGAGATTTT
ATTCAGAAGC CTTTTTCCCT GAAAGCCCTC ATGGAAAGCG TGCATAATCT GCTGAAGCCT
TCCTCTTCGT AA
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| Protein sequence | MHEDNNKREA LSGSPVIMNA EQVYAISRQQ LQLFMSATHA GIWEWDTVTN SVIWSDEVWA
LYGLNASCCD ATFEAWLSSV HPEDREKTEK TVLGAARDDV AFEVAWRSRD LDGNERWLMS
KGFPLRDGAG RTGRYVGIVL DITDRKQAED ALCESEDRFR KLFESLSEIK LIIDSHSGKI
IDANQAAVDF YGWSIEELTS MNIEQINTTS SELVTLDTEK CGSLHQSCVS FRHRRADGSI
RDVEVFSNNI EIAGNILYYS TIHDVTERKR FEALTAFRLR LLDMAENRSV EELLKATLDE
SECMTESSFS FCCFLMDERS SPTLQVLSTS TEKAMSLMNR NQEVFSQLSE SSIWSAAILE
KKAVIHNDVE RDLPEDHPFF KRKLVVPIVQ GDTVMAIIGV GNKQYPYDED DARWVGTLAD
VAWDIVARKR AELSEKNTQE ALSQSQKMEM VGRLAGGIAH DFNNMLGVIL GHTEIALEQL
DPSESAYADL EAIRKAAARS AGLIRQLLAF ARKQTVMPKI ISLNTMVEGM LTMMRRLIGE
NITLVWIPEN QNAKIKIDPS QIDQILANLC VNARDSIVGG GRITIETGRL CVQRNENTAN
HPCRIPGDYV TLAVTDNGSG IDKKHLPHIF EPFFTTKEQG KGTGLGLSTV YGIVKQNNGC
IDCQSEPGKG TCIKIHLPRY IDKADSVPVE TPEQSITRGK ETILLVEDEP DILKLCKLML
ENNGYTVLSA DTPNEAIRIA AKHKGGIGLL LTDVVMPEMN GCDLSNKLRI TSPNLKTLFM
SGYTADIISR HGVLDDGGDF IQKPFSLKAL MESVHNLLKP SSS
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