| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1522 |
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| Symbol | trmD |
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| ID | 4569572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1730861 |
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| End bp | 1731562 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 639766104 |
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| Product | tRNA (guanine-N(1)-)-methyltransferase |
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| Protein accession | YP_911968 |
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| Protein GI | 119357324 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00200565 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGATCCGA TGCGGATTGA TGTTATTTCC GTTATCCCCG GTTTTTTCGA TTCGGCCCTT
CATAACGGTC TTTTGAGCAT AGCCCGGAAG AAAGAGTATG TGGAAATTCA TGTCCATAAC
CTTCACGACT ATGGACTGGG ACGGTACCGA CAGGTTGACG ATACGCCGTT TGGAGGTGGA
GCAGGCATGG TTCTGCGTCC GGAACCGGTG TTTTCATGTA TTGAAGCCCT CACGGGCGAG
AGGGAGTATG ATGCGGTGAT TTTTCCAACA CCGGACGGCA AGCCGTTTGA ACAGGCTCTT
GCAAACCGGT TTTCCCGCAT GAAAAACCTG ATTATTCTTT GTGGGCATTA CAAGGCCCTT
GACGAAAGGG TTCGTCAGAC GCTTGTAACC ATGGAGTTGT CAGTTGGTGA TGTAGTGGTT
TCGGGCGGAG AGATACCGGC ACTGCTTATT ATGGATGCCG TTGTGCGATT GATTCCGGGA
GTGCTTGGCG ACAGCGAGTC GGCCTTGACG GATTCTTTTC AGACAGGAAT GCTTGATAGC
GTCTATTACA CCCGGCCTTC AGAGTTCAGA GGAATGAAAG TCCCTGATGT TTTGTTGTCA
GGCAATCATC GTAATATTGA GCAGTGGCGT TATGATAATG CCTTGCAGCG AACAACCCGG
AGACGTCCCG ATCTGCTGGA TATGAAAAGT TTTGAAGATT GA
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| Protein sequence | MDPMRIDVIS VIPGFFDSAL HNGLLSIARK KEYVEIHVHN LHDYGLGRYR QVDDTPFGGG
AGMVLRPEPV FSCIEALTGE REYDAVIFPT PDGKPFEQAL ANRFSRMKNL IILCGHYKAL
DERVRQTLVT MELSVGDVVV SGGEIPALLI MDAVVRLIPG VLGDSESALT DSFQTGMLDS
VYYTRPSEFR GMKVPDVLLS GNHRNIEQWR YDNALQRTTR RRPDLLDMKS FED
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