| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1266 |
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| Symbol | secA |
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| ID | 4570400 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 1441873 |
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| End bp | 1444941 |
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| Gene Length | 3069 bp |
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| Protein Length | 1022 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639765857 |
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| Product | preprotein translocase subunit SecA |
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| Protein accession | YP_911723 |
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| Protein GI | 119357079 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
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| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAAAA TCTTTGAAAA GGTATTCGGT TCAAAGCACG ATAAAGATAT TAAGAGAATC
CAGCCGACCA TACAGCGGAT TAATGAAATA CAGGCCTCGT TTCAGTCGCT TTCCGACGAG
GCTCTGCGCG AAAAGGGTTC TCTGCTCCGT CAGCAAGTAC GATCCCGGCT TCTGCCTTTA
GAGCAGCAGA AAAAAGAGCT CGCCCTGAAA CTTGAAAATC CCGACATCCT GCCTGCTGAT
GCGGATAACA TCAATGCTTC GCTTGATGCT CTCGGTGAAG AGTATGATAA AGTTACGGCC
CTGGCGCTTG AGGAGTCGCT GCCTGATGTT TTTGCTCTGG TCAAGGAGAC CTGTCGTCGT
CTCAAGGGCC ACAACTATCA GGTTATGGGC CGTGAAATGA TCTGGGATAT GGTGCCCTAC
GATGTTCAGC TTATTGGCGG CATCGTGCTC CATTCCGGCA AAATAACCGA AATGGCTACC
GGCGAGGGAA AAACTCTCGT CTCAACCCTT CCCGTTTTTC TCAACGCTCT CACCGGAAGA
GGGGTTCATG TCGTGACGGT GAACGACTAT CTTGCCCAGC GCGACAAGGA GTGGATGAAT
CCTGTATTTG CCTTTCACGG ACTCACTGTA GGGGTTATCC TCAACACCAT GCGGCCTGAA
GAGCGCAAGC GGCAGTACCT TTGCGATGTT ACCTACGGTA CCAATAATGA GTTCGGTTTT
GATTACCTCC GGGACAATAT GGCCGGAACA GTCGAGGAAA TGGTTCAGCG GGACTTTTAT
TTCGCTATCG TTGATGAGGT TGACAGCGTG TTGATCGATG AAGCAAGAAC ACCGCTTATT
ATTTCAGGAC CGGTACCTAA TGCTGATAAC AGCAAGTTTC AGGAGATCAA ACCCTGGATT
GAACATCTTG TCCGTTCTCA GCAGCAACTG GTAGCGTCCT GCCTTGTTGA GGCGGAAAAG
CTTCTGAAAA CAAAACCGAA CGATTTTCAG GCAGGACTTG CTTTGCTCCG GGTAAAACGC
GGACAGCCGA AAAACAGCCG ATATATCAAA ATGCTCTCGC AACAGGGCAT TGCAAAACTG
GTACAGAGTA CGGAAAACGA GTATCTCAAA GACAATGCAA GCCAGATGCA TGAGGTTGAT
GACGAGCTGT ATTTTGCGGT TGATGAAAAA GCCGGCACTA TAGATTTAAC CGATAAAGGG
AGAGCGTTTT TAAGCAAACT GAGTCATCAG GACACTGATT TGTTTCTTCT TCCCGATGTA
GGTACTGAAA TTGCCGCCAT TGAAGGGTCT TCGTCTTTTT CGACTGCGGA AAAGATCAAA
CAGAAAGATG CGGTTTATCG CCTGTTTGCA GACCGCTCTG AACGGTTGCA TAATATCAGC
CAGCTTCTCA AAGCCTACTC GCTCTTTGAG CGTGACGACG AGTATGTTGT TCAGGACGGC
AAGGTGATGA TTGTTGATGA ATTTACCGGT CGCATTCTTT CCGGACGTCG TTACAGCGAT
GGATTGCATC AGGCTATCGA AGCCAAGGAA AATGTCAGGA TTGAAGGCGA AACGCAGACA
ATGGCAACCA TCACCATTCA AAACTTTTTT CGACAGTACC ACAAACTTGC AGGTATGACC
GGTACGGCCG AAACTGAAGC ATCGGAATTT TATGAGATTT ACAAGCTCGA TGTTGTCGTA
ATTCCGACAA ACAAGCCTGT TGTTCGAAAA GACATGGATG ATCTTGTCTA CAAGACCCGT
CGGGAAAAGT ATAACGCCGT TGTTCTGAAA GTTGAGGAAC TCCAGAAAAA GGGGCAGCCG
GTGCTTGTTG GAACTGCAAG TGTTGAGGTA TCGGAAACCC TGTCAAGAAT GCTCAGGGCA
AAACGGATTG TCCATAACGT GCTTAATGCG AAACAAAATG ACCGGGAGGC GGAGGTTGTT
GCTGAAGCCG GACAGCGTTC AGCGGTGACC ATTGCCACCA ACATGGCTGG TCGAGGTACC
GATATCAAGC TCGGAGAAGG CGTTCGCGAA CTTGGAGGAC TTTATATTCT CGGTTCAGAG
CGACACGAAT CGCGTCGTAT TGACCGTCAG CTTCGGGGAC GGGCCGGTCG TCAGGGCGAC
CCTGGAGAGT CGGTGTTTTT TGTTTCGCTG GAGGATGAAC TCATGCGGCT TTTTGGATCT
GAGCGGGTTA TTTCGGTCAT GGACAAGCTT GGCCATGAAG AGGGCGATGT TATTGAACAC
TCCATGATCA CCAAGTCTAT TGAACGGGCG CAGAAAAAAG TTGAGGAGCA GAACTTTTCT
ATTCGAAAGC GTCTGCTTGA ATACGATGAC GTTTTGAACC AGCAGCGCGA TGTGATTTAC
ACCCGTCGCA GAAATGGCTT ACAGAAAGAT CGGCTGCGAA GCGATATTTT TGATCTGCTT
GAAGATTATT GTGACGTTGT GGTTAAAAAA TATCAGAAAG GTGCTGATGG TATGGCTCTC
GAAGAGCAGG TGCTTCGTGA ACTGTCGGTA GAATTCAGAC CCGAGAAAGC CGAGTTCAAT
GACGATACTG TCGGAGGAGT CGCTGACAAA CTCTTTAATG CCGCACACGA CTTCTACCTT
CGAAAAGAAC GTGAGGTACC TGAAGATATC ATGCGACAGA TCGAAAAATA TGCGGTACTC
AGCGTTATCG ACAAGAAATG GCGCGATCAT CTTCGTGAAA TTGATTCCCT CAGGGAGGGA
ATCAATCTCC GGGCTTATGG TCAGAAAGAT CCCCTTCTTG AGTACAAACA GGAAGCTTTC
AGGCTTTTTG TTGAACTTTT GCGTGAAATT GAGCTTGAAA CCCTCTCGCT CGCCTTCAAG
CTGTTTCCGA TAACTCCTGA AGAAGCGCAT GACATTGAGG TTCGCCAGAA AAAAGAGGCT
TTACGCACCG AAAAACTTGT CGCACAACAT GAAGAGGCCG GGAGTATTTT AAGCCACGAA
TCGGATGTTC CTTCCGGAAC TGCCGCCCAG CAGCCGATAA AAGCGGATGT GAAACCCGGA
AGAAATGACC TTTGCCCCTG CGGCAGCGGA AAGAAGTATA AAAACTGTCA TGGCCAGCAG
CAGCCCTGA
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| Protein sequence | MLKIFEKVFG SKHDKDIKRI QPTIQRINEI QASFQSLSDE ALREKGSLLR QQVRSRLLPL
EQQKKELALK LENPDILPAD ADNINASLDA LGEEYDKVTA LALEESLPDV FALVKETCRR
LKGHNYQVMG REMIWDMVPY DVQLIGGIVL HSGKITEMAT GEGKTLVSTL PVFLNALTGR
GVHVVTVNDY LAQRDKEWMN PVFAFHGLTV GVILNTMRPE ERKRQYLCDV TYGTNNEFGF
DYLRDNMAGT VEEMVQRDFY FAIVDEVDSV LIDEARTPLI ISGPVPNADN SKFQEIKPWI
EHLVRSQQQL VASCLVEAEK LLKTKPNDFQ AGLALLRVKR GQPKNSRYIK MLSQQGIAKL
VQSTENEYLK DNASQMHEVD DELYFAVDEK AGTIDLTDKG RAFLSKLSHQ DTDLFLLPDV
GTEIAAIEGS SSFSTAEKIK QKDAVYRLFA DRSERLHNIS QLLKAYSLFE RDDEYVVQDG
KVMIVDEFTG RILSGRRYSD GLHQAIEAKE NVRIEGETQT MATITIQNFF RQYHKLAGMT
GTAETEASEF YEIYKLDVVV IPTNKPVVRK DMDDLVYKTR REKYNAVVLK VEELQKKGQP
VLVGTASVEV SETLSRMLRA KRIVHNVLNA KQNDREAEVV AEAGQRSAVT IATNMAGRGT
DIKLGEGVRE LGGLYILGSE RHESRRIDRQ LRGRAGRQGD PGESVFFVSL EDELMRLFGS
ERVISVMDKL GHEEGDVIEH SMITKSIERA QKKVEEQNFS IRKRLLEYDD VLNQQRDVIY
TRRRNGLQKD RLRSDIFDLL EDYCDVVVKK YQKGADGMAL EEQVLRELSV EFRPEKAEFN
DDTVGGVADK LFNAAHDFYL RKEREVPEDI MRQIEKYAVL SVIDKKWRDH LREIDSLREG
INLRAYGQKD PLLEYKQEAF RLFVELLREI ELETLSLAFK LFPITPEEAH DIEVRQKKEA
LRTEKLVAQH EEAGSILSHE SDVPSGTAAQ QPIKADVKPG RNDLCPCGSG KKYKNCHGQQ
QP
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