Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1266 |
Symbol | secA |
ID | 4570400 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1441873 |
End bp | 1444941 |
Gene Length | 3069 bp |
Protein Length | 1022 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 639765857 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_911723 |
Protein GI | 119357079 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTAAAAA TCTTTGAAAA GGTATTCGGT TCAAAGCACG ATAAAGATAT TAAGAGAATC CAGCCGACCA TACAGCGGAT TAATGAAATA CAGGCCTCGT TTCAGTCGCT TTCCGACGAG GCTCTGCGCG AAAAGGGTTC TCTGCTCCGT CAGCAAGTAC GATCCCGGCT TCTGCCTTTA GAGCAGCAGA AAAAAGAGCT CGCCCTGAAA CTTGAAAATC CCGACATCCT GCCTGCTGAT GCGGATAACA TCAATGCTTC GCTTGATGCT CTCGGTGAAG AGTATGATAA AGTTACGGCC CTGGCGCTTG AGGAGTCGCT GCCTGATGTT TTTGCTCTGG TCAAGGAGAC CTGTCGTCGT CTCAAGGGCC ACAACTATCA GGTTATGGGC CGTGAAATGA TCTGGGATAT GGTGCCCTAC GATGTTCAGC TTATTGGCGG CATCGTGCTC CATTCCGGCA AAATAACCGA AATGGCTACC GGCGAGGGAA AAACTCTCGT CTCAACCCTT CCCGTTTTTC TCAACGCTCT CACCGGAAGA GGGGTTCATG TCGTGACGGT GAACGACTAT CTTGCCCAGC GCGACAAGGA GTGGATGAAT CCTGTATTTG CCTTTCACGG ACTCACTGTA GGGGTTATCC TCAACACCAT GCGGCCTGAA GAGCGCAAGC GGCAGTACCT TTGCGATGTT ACCTACGGTA CCAATAATGA GTTCGGTTTT GATTACCTCC GGGACAATAT GGCCGGAACA GTCGAGGAAA TGGTTCAGCG GGACTTTTAT TTCGCTATCG TTGATGAGGT TGACAGCGTG TTGATCGATG AAGCAAGAAC ACCGCTTATT ATTTCAGGAC CGGTACCTAA TGCTGATAAC AGCAAGTTTC AGGAGATCAA ACCCTGGATT GAACATCTTG TCCGTTCTCA GCAGCAACTG GTAGCGTCCT GCCTTGTTGA GGCGGAAAAG CTTCTGAAAA CAAAACCGAA CGATTTTCAG GCAGGACTTG CTTTGCTCCG GGTAAAACGC GGACAGCCGA AAAACAGCCG ATATATCAAA ATGCTCTCGC AACAGGGCAT TGCAAAACTG GTACAGAGTA CGGAAAACGA GTATCTCAAA GACAATGCAA GCCAGATGCA TGAGGTTGAT GACGAGCTGT ATTTTGCGGT TGATGAAAAA GCCGGCACTA TAGATTTAAC CGATAAAGGG AGAGCGTTTT TAAGCAAACT GAGTCATCAG GACACTGATT TGTTTCTTCT TCCCGATGTA GGTACTGAAA TTGCCGCCAT TGAAGGGTCT TCGTCTTTTT CGACTGCGGA AAAGATCAAA CAGAAAGATG CGGTTTATCG CCTGTTTGCA GACCGCTCTG AACGGTTGCA TAATATCAGC CAGCTTCTCA AAGCCTACTC GCTCTTTGAG CGTGACGACG AGTATGTTGT TCAGGACGGC AAGGTGATGA TTGTTGATGA ATTTACCGGT CGCATTCTTT CCGGACGTCG TTACAGCGAT GGATTGCATC AGGCTATCGA AGCCAAGGAA AATGTCAGGA TTGAAGGCGA AACGCAGACA ATGGCAACCA TCACCATTCA AAACTTTTTT CGACAGTACC ACAAACTTGC AGGTATGACC GGTACGGCCG AAACTGAAGC ATCGGAATTT TATGAGATTT ACAAGCTCGA TGTTGTCGTA ATTCCGACAA ACAAGCCTGT TGTTCGAAAA GACATGGATG ATCTTGTCTA CAAGACCCGT CGGGAAAAGT ATAACGCCGT TGTTCTGAAA GTTGAGGAAC TCCAGAAAAA GGGGCAGCCG GTGCTTGTTG GAACTGCAAG TGTTGAGGTA TCGGAAACCC TGTCAAGAAT GCTCAGGGCA AAACGGATTG TCCATAACGT GCTTAATGCG AAACAAAATG ACCGGGAGGC GGAGGTTGTT GCTGAAGCCG GACAGCGTTC AGCGGTGACC ATTGCCACCA ACATGGCTGG TCGAGGTACC GATATCAAGC TCGGAGAAGG CGTTCGCGAA CTTGGAGGAC TTTATATTCT CGGTTCAGAG CGACACGAAT CGCGTCGTAT TGACCGTCAG CTTCGGGGAC GGGCCGGTCG TCAGGGCGAC CCTGGAGAGT CGGTGTTTTT TGTTTCGCTG GAGGATGAAC TCATGCGGCT TTTTGGATCT GAGCGGGTTA TTTCGGTCAT GGACAAGCTT GGCCATGAAG AGGGCGATGT TATTGAACAC TCCATGATCA CCAAGTCTAT TGAACGGGCG CAGAAAAAAG TTGAGGAGCA GAACTTTTCT ATTCGAAAGC GTCTGCTTGA ATACGATGAC GTTTTGAACC AGCAGCGCGA TGTGATTTAC ACCCGTCGCA GAAATGGCTT ACAGAAAGAT CGGCTGCGAA GCGATATTTT TGATCTGCTT GAAGATTATT GTGACGTTGT GGTTAAAAAA TATCAGAAAG GTGCTGATGG TATGGCTCTC GAAGAGCAGG TGCTTCGTGA ACTGTCGGTA GAATTCAGAC CCGAGAAAGC CGAGTTCAAT GACGATACTG TCGGAGGAGT CGCTGACAAA CTCTTTAATG CCGCACACGA CTTCTACCTT CGAAAAGAAC GTGAGGTACC TGAAGATATC ATGCGACAGA TCGAAAAATA TGCGGTACTC AGCGTTATCG ACAAGAAATG GCGCGATCAT CTTCGTGAAA TTGATTCCCT CAGGGAGGGA ATCAATCTCC GGGCTTATGG TCAGAAAGAT CCCCTTCTTG AGTACAAACA GGAAGCTTTC AGGCTTTTTG TTGAACTTTT GCGTGAAATT GAGCTTGAAA CCCTCTCGCT CGCCTTCAAG CTGTTTCCGA TAACTCCTGA AGAAGCGCAT GACATTGAGG TTCGCCAGAA AAAAGAGGCT TTACGCACCG AAAAACTTGT CGCACAACAT GAAGAGGCCG GGAGTATTTT AAGCCACGAA TCGGATGTTC CTTCCGGAAC TGCCGCCCAG CAGCCGATAA AAGCGGATGT GAAACCCGGA AGAAATGACC TTTGCCCCTG CGGCAGCGGA AAGAAGTATA AAAACTGTCA TGGCCAGCAG CAGCCCTGA
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Protein sequence | MLKIFEKVFG SKHDKDIKRI QPTIQRINEI QASFQSLSDE ALREKGSLLR QQVRSRLLPL EQQKKELALK LENPDILPAD ADNINASLDA LGEEYDKVTA LALEESLPDV FALVKETCRR LKGHNYQVMG REMIWDMVPY DVQLIGGIVL HSGKITEMAT GEGKTLVSTL PVFLNALTGR GVHVVTVNDY LAQRDKEWMN PVFAFHGLTV GVILNTMRPE ERKRQYLCDV TYGTNNEFGF DYLRDNMAGT VEEMVQRDFY FAIVDEVDSV LIDEARTPLI ISGPVPNADN SKFQEIKPWI EHLVRSQQQL VASCLVEAEK LLKTKPNDFQ AGLALLRVKR GQPKNSRYIK MLSQQGIAKL VQSTENEYLK DNASQMHEVD DELYFAVDEK AGTIDLTDKG RAFLSKLSHQ DTDLFLLPDV GTEIAAIEGS SSFSTAEKIK QKDAVYRLFA DRSERLHNIS QLLKAYSLFE RDDEYVVQDG KVMIVDEFTG RILSGRRYSD GLHQAIEAKE NVRIEGETQT MATITIQNFF RQYHKLAGMT GTAETEASEF YEIYKLDVVV IPTNKPVVRK DMDDLVYKTR REKYNAVVLK VEELQKKGQP VLVGTASVEV SETLSRMLRA KRIVHNVLNA KQNDREAEVV AEAGQRSAVT IATNMAGRGT DIKLGEGVRE LGGLYILGSE RHESRRIDRQ LRGRAGRQGD PGESVFFVSL EDELMRLFGS ERVISVMDKL GHEEGDVIEH SMITKSIERA QKKVEEQNFS IRKRLLEYDD VLNQQRDVIY TRRRNGLQKD RLRSDIFDLL EDYCDVVVKK YQKGADGMAL EEQVLRELSV EFRPEKAEFN DDTVGGVADK LFNAAHDFYL RKEREVPEDI MRQIEKYAVL SVIDKKWRDH LREIDSLREG INLRAYGQKD PLLEYKQEAF RLFVELLREI ELETLSLAFK LFPITPEEAH DIEVRQKKEA LRTEKLVAQH EEAGSILSHE SDVPSGTAAQ QPIKADVKPG RNDLCPCGSG KKYKNCHGQQ QP
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