Gene Cpha266_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1253 
Symbol 
ID4570387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1423437 
End bp1425458 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content45% 
IMG OID639765844 
Productmulti-sensor signal transduction histidine kinase 
Protein accessionYP_911710 
Protein GI119357066 
COG category[T] Signal transduction mechanisms 
COG ID[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCGAA CTGGCGAGAT CCCGACCATA CTTGTTGCAG ATAATTGTGT GATCAGTCGG 
AGGTCAATAT CCGATGCAAT CTGTGAGCAG GGCTATAAAG CAGTAGTCGC AGAGGATGGA
GCTGGCTGTA GGGATCTTCT TGGTAAGGAT AAAACAGATC TTCTTTTTCT GGATGCCGGT
ATTGATGATG ACAAGGGCGT CGAATTACTT GTCGCTGTTA AAGATAATTA TCCGGATATT
CCGGTCATTG TAATTTCCTC ATCAATCTCG TTTGAGCAGG AAGCTCTCTT TTTTAAGATG
GGAGCGAGTG AATATCTGAT AAAACCGCTC AGTTCCGTCA GGCTTGCCGT CACCATCAAA
AAAGCACTTT TGGAATCGGA ATACCGAAAA AAGGATAAAC TGTTTTCGGT GGTGATTACC
CACAGCCCCA TAGCAGTGGC TATAACCGAC AATACCGGAC ATTTTGAGTA TGTCAATCAT
GCTTTTTGCA AAACAACCGG TTATGCATTC CATGAAGTAA TCGGCAAAAC ACCCCGGTTG
TTACAGTCCG GAGAACATGC CGAAAGTTTC TATAAAGAAC TATGGGATAC TATCCGCTCC
GGAAAAAACT GGCAGGGCGA ATTTCACAAC AAAAAAAAAA CCGGAGAACT CTACTGGGAA
AACTCGATCA TCATCCCGAT TTTCGATCCA TCAGGAACGC TTTCCCACTT TTTAAGCATC
AAGCAGGACA TCTCTCTTCG TAAAAAAGAA CAGGAAGCCC TTCTGCAAAG TGAACGTCGC
TTTCAGGAAC TTGCCGATCT TCTTCCCCTC CCTCTTATTG AAACCGATAC GGAGGGTATG
ATTACCTATA CTAATTGTGT AGGCCTTGAA GCATTCGGGT ATACAACAGA GGATCTTGCA
AACGGTATTC ATGGCGTCAT GCTCTTTTTA CCTGAAGAAA GGCAGAGAGT TATACTCAAC
ATAGAAATGC GGTTGAAAAA TATTCCGTTT GAGAATCATG AGTATATCGG CCTGAGAAAA
GACGGAACCA CCTTTCCTCT TCTTGTTTAT ACCGCAAGCA TAATGCATAA CAACGTTCCT
GTGGGCATTC GTGCTATTGT GCTTGATATT ACAAATCGTA AGCAAGCCGA AGAAAAGCTT
ATGCAGCTCA ATCAGACTCT TGAACTCAGG GTGCAGGAGC GAACCAGAGA GCTTGAAATT
ACGCATAAGC AGATGATTCT GCAGGAAAAA CTTGCTTCCA TTGGTCAGTT GGCCGCCGGT
ATCGCCCATG AACTGAACAA TCCCATCAAC TTTGTCAGAA TCAATTTCGC AACACTGGAG
GAAGACATTG CTGATCTGCA GAGCCTTCTC AATGCGTATC GCAACGTCAT TGACAAAGTC
GGTAAAGATC TTTTACCAAA AGATGAGGTG GATCGGCTGC GTCAGCTTGA GCACTCTCTT
GCTATAGACA CGCTGTGTGA TGAGCTACCC GGAATTTTTA GTGAATCACA TCGGGGTTTT
GAGCGAATCA CAGCTATTAT CGGAAGCATG CGGAACTTTT CGTTCTGTCA CGACTTACAG
GAACGGGTAC CGTTTTATAT CAATACAGGG ATTCGGGATG CGCTTATCAT TACCAGAAAC
GAATATCTAT CCTTTGCTGA TTTGACCACG CAACTTGAAG ATCTGCCGCC GGTTCCCTGT
AATCCCGAGC AGATCAACCA GGTTTTTCTC AATCTTATTA TTAACAGCGC TCAGGCCATT
GAATCGCAAA AGAGGTCCGA AAACGGAAAA ATCACCATTT GCACCTGGTT CGACAACCGG
AGTGTTTTCT GTGCTGTAAC CGATGACGGG CCGGGTATTC CTTGTGAAAT CCAGCACCGA
ATTTTCGAAC CATTTTTCAC CACGAAGCCA CCGGGAAAAG GTACCGGCCT CGGTCTGAGC
ATCTCCTACG ATATCGTTGT TCATAAACAT GGAGGAACTC TTGATGTTCA TTGTCCGCCT
GAAGGGGGAA CCGTTATTAC CCTGTCGCTT CCTCTTGGTT GA
 
Protein sequence
MNRTGEIPTI LVADNCVISR RSISDAICEQ GYKAVVAEDG AGCRDLLGKD KTDLLFLDAG 
IDDDKGVELL VAVKDNYPDI PVIVISSSIS FEQEALFFKM GASEYLIKPL SSVRLAVTIK
KALLESEYRK KDKLFSVVIT HSPIAVAITD NTGHFEYVNH AFCKTTGYAF HEVIGKTPRL
LQSGEHAESF YKELWDTIRS GKNWQGEFHN KKKTGELYWE NSIIIPIFDP SGTLSHFLSI
KQDISLRKKE QEALLQSERR FQELADLLPL PLIETDTEGM ITYTNCVGLE AFGYTTEDLA
NGIHGVMLFL PEERQRVILN IEMRLKNIPF ENHEYIGLRK DGTTFPLLVY TASIMHNNVP
VGIRAIVLDI TNRKQAEEKL MQLNQTLELR VQERTRELEI THKQMILQEK LASIGQLAAG
IAHELNNPIN FVRINFATLE EDIADLQSLL NAYRNVIDKV GKDLLPKDEV DRLRQLEHSL
AIDTLCDELP GIFSESHRGF ERITAIIGSM RNFSFCHDLQ ERVPFYINTG IRDALIITRN
EYLSFADLTT QLEDLPPVPC NPEQINQVFL NLIINSAQAI ESQKRSENGK ITICTWFDNR
SVFCAVTDDG PGIPCEIQHR IFEPFFTTKP PGKGTGLGLS ISYDIVVHKH GGTLDVHCPP
EGGTVITLSL PLG