Gene Cpha266_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1246 
Symbol 
ID4570264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1413557 
End bp1415419 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content47% 
IMG OID639765837 
ProductCl- channel, voltage-gated family protein 
Protein accessionYP_911703 
Protein GI119357059 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACTAT CACCTAAAAA AAAGGGGAGT CTCAGCAGAA AGGGGCTGGC TTTTTTTTAC 
AGTATTTCAA GGCGAAGCAG GTATTTCAAA GGGACTTTTC AACAGTTTTT CAGGCTGACT
TTAAAATATT TCCTTGTTCA ACTGAATCTG AACCAGGATA TTCCGTTTTT GTTTGTGGCT
GTAGGAGTTG GCCTTCTTAC CGGATATGTG GCTGTGGTGT TTCACGATGC TATTATGGTA
ATCAGTACCA TCTGTTTTAC AGGAATTCCT TCGTTGGCAA GTGCGCCTTT TTTTGAGAAG
TACCGGATGA TTATGCTTCC ACTCATTCCC GCTTTCGGCG GTCTTCTTGT CGGTCTCTAT
AACGCGTTTG TGGTAAAGGA GCGTCCGGGA CACGGGCTTG CGTCAGTAAT CAAGGCCGTT
GCTCAGAATG ATGGTGTTCT TAACCGTAAG CTCTGGATTC ACAGAAGCAT AACATCGGTA
TTAAGCATCG GTACAGGCGG CGGTGGTGGA CGAGAAGCGC CGATTGTTCA GGTTGGCGCA
GCAATTGGTT CAACTGTTGC TCAGGTGCTG AAATTCTCGC CAAATAAAAC CCGTACCCTC
CTTGGTTGCG GGGCGGCTGC CGGGCTCGCC GCAGTTTTCA ATACGCCTAT CGGTGGCGTT
ATGTTTGCCA TTGAGGTGCT GCTTGGAGAT TTCAGCGTGA AGACCTTCAG TCCTATTGTG
ATTGCCGCCG TTATCGGCAC CGTGCTTTCA AGAAGTTTTC TTGGCAATTC CCCGACATTT
CAGGTTCATG AGTATACCCT TGTTTCAAAT ACAGAGCTGG TTTTTTATTT TCTTCTCGGC
ATTCTTGCCG GTCTTTCGGC GGTTTTGTTT ATCAGAATCT ATTACGCCAT AGAGGAGTGG
TTCGAGAGAA TTGAAAAACG GTGGAAAATT CCGGTATGGG CAATGCCTGC AATCGGCGGG
TTCATGGCCG GTCTGATCTG TTTATGGCTT CCCGGACTGT ATGGGTTTTC CTATGAAGCT
ATTAACACGG CTCTGCTTGG TAATGAAAGC TGGACCAACA TGGTTGGTAT CTATTTTCTC
AAACCGGTTG TTGCAGCTCT ATCGGTTGGT TCCGGCGGTT CCGGAGGCAT GTTTGCACCA
GCCATGAAAA TGGGCGCAAT GCTTGGCGGT ATGTTCGGCA ATGCCGTCCA TATGCTTTTC
CCTGAAATCA CGGCAACGTC GGGAGCTTAC GCCCTTGTCG GCATGGGCGC CCTGACAGCC
GGGATCATGA GAGCCCCGCT GTCGGTGATT CTCATTCTTT TTGAAATAAC CGGCCAGTAT
GAAATCGTAT TGCCCATCAT GTTTGCCGCC GTAACATCAG CTCTCATTGC CCGGCTTGTT
TACCGTCACA GTATGGAAAC CTACGTTCTT GAAAAAGAGG GGGTCAGAGT AGGATTTGGT
ATCGCGCTTT CAGTGGCCGA GCATATCAAT ATTTCAGATG TTATAAAAAA AAACTACATA
AAATTTACAA ACACCGTTCG AGCAACAGTC ATCATCGATA CTTTTTACAA TACGCCTGAA
TCATGTTTTT TGGTTACGGA TAACAGGGGA AGATTTTCGG GACTCATAAG GCTCGATGAG
ATGCGTATTC TGCTCAGGGA GGGATTGCCA GACGGGCTGA TTGCGGAGGA TGTGACAAAA
AAGGATGTTC CCGTTCTTTA CAATACGTCT AAGCTTGATG AGGCGTTAAA GCTATTTGAA
ATAACGGATT ATGATATGTT GCCGGTTCTG GATGAAGAGA CGGACATACT CCTCGGGGTT
GTTCATCAGG AAGAGGCCTT TGCCTATTAT CGCAAACAGC TCAATCTTTA CAGTTCTACA
TGA
 
Protein sequence
MKLSPKKKGS LSRKGLAFFY SISRRSRYFK GTFQQFFRLT LKYFLVQLNL NQDIPFLFVA 
VGVGLLTGYV AVVFHDAIMV ISTICFTGIP SLASAPFFEK YRMIMLPLIP AFGGLLVGLY
NAFVVKERPG HGLASVIKAV AQNDGVLNRK LWIHRSITSV LSIGTGGGGG REAPIVQVGA
AIGSTVAQVL KFSPNKTRTL LGCGAAAGLA AVFNTPIGGV MFAIEVLLGD FSVKTFSPIV
IAAVIGTVLS RSFLGNSPTF QVHEYTLVSN TELVFYFLLG ILAGLSAVLF IRIYYAIEEW
FERIEKRWKI PVWAMPAIGG FMAGLICLWL PGLYGFSYEA INTALLGNES WTNMVGIYFL
KPVVAALSVG SGGSGGMFAP AMKMGAMLGG MFGNAVHMLF PEITATSGAY ALVGMGALTA
GIMRAPLSVI LILFEITGQY EIVLPIMFAA VTSALIARLV YRHSMETYVL EKEGVRVGFG
IALSVAEHIN ISDVIKKNYI KFTNTVRATV IIDTFYNTPE SCFLVTDNRG RFSGLIRLDE
MRILLREGLP DGLIAEDVTK KDVPVLYNTS KLDEALKLFE ITDYDMLPVL DEETDILLGV
VHQEEAFAYY RKQLNLYSST