Gene Cpha266_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1237 
Symbol 
ID4570255 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1405057 
End bp1405746 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content49% 
IMG OID639765828 
ProductHAD family hydrolase 
Protein accessionYP_911694 
Protein GI119357050 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCTGTA AAGCAGTAAT CTTTGATCTT GACGGAACCC TTCTCAATAC TCTTGAAGAT 
ATAGTCAACA CCCTCAACTC CGTTCTTTAT CAGCATAACT ATCCACAGCA CTCGGTTGAT
GCCTGCCGGT TTCTTGTTGG CCACGGCATG AGAGAACTTG TCAAAAAAGC CCTTCCCGAA
GAGGCCGGAA CACCGGAAAT TATCGATTCC ATGCTTGAGG ATCTGCTGAT CCATTATGCT
GAAAACTGGA ATGTGCACTC CCGCCCCTAT GAAGGTATTG CCGCAATGCT TGACGAACTG
ACCGCACAGG GAATAAAAAA AGCCATTCTC TCCAATAAAG CCGATAATTT CACCCGTCTG
TGTGCTGAAC AATTGCTTTC AGATTGGCAT TTCGATATGG TCATGGGTCA TACCGATACG
TTTACGCACA AGCCGGATCC TTCAGGAGCG CTGTTTATAG CCGGTCAGCT CGGTATCGAA
CCCGGTGATA TTCTCTATGT CGGAGACAGC GGGATCGATA TGCTGACGGC TACCCGAGCC
GGAATGTTCC CGCTCGGAGT ATTGTGGGGG TTCAGACCTG AATCCGAACT GCTGCAATTC
GGAGCAAAAG CGCTCGTAAA AGAACCGGGA GAGATCATCA CGATGCTTAT GAACTGTCCG
GGCTGTCCGG GAAATTCAGC ATCGCGCTGA
 
Protein sequence
MPCKAVIFDL DGTLLNTLED IVNTLNSVLY QHNYPQHSVD ACRFLVGHGM RELVKKALPE 
EAGTPEIIDS MLEDLLIHYA ENWNVHSRPY EGIAAMLDEL TAQGIKKAIL SNKADNFTRL
CAEQLLSDWH FDMVMGHTDT FTHKPDPSGA LFIAGQLGIE PGDILYVGDS GIDMLTATRA
GMFPLGVLWG FRPESELLQF GAKALVKEPG EIITMLMNCP GCPGNSASR