Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1203 |
Symbol | |
ID | 4570071 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1365920 |
End bp | 1371229 |
Gene Length | 5310 bp |
Protein Length | 1769 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639765797 |
Product | outer membrane autotransporter |
Protein accession | YP_911663 |
Protein GI | 119357019 |
COG category | [S] Function unknown |
COG ID | [COG4625] Uncharacterized protein with a C-terminal OMP (outer membrane protein) domain |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTAC GCCGTATTCC CACGCTCTCT TCGGGTATTA CTGATCGTTC CGAACGTAAA AAGCAGGCTC GCCCCAGTGG CCGCAGCGGA ATCCGCCTCT GTCTGCTTCT GGCCCTTCTA TGCCACACAG GAATACCCGA AAGCGCATCC GGTGAATATT TGAAGGCTAA CTATAGTAGT CCTATCAAAC TGAATGAATC TACCGCTTAT GAGAACAAAA AAAACGTAGT GCAATATCAA GACGTAACTA TAACTGAGAA CGGTGCCGTA GATACCTGGA ATACAACAGA GATTAAAATA GGAGGATTAG GCAAAAAATT GTCCATTAAT GGCACACTAT ACAATAATGG ATCATTATCT AACAATGCCT TTTCAACTGC CAAGATCAAT ATCGGCAGCA CCGGAATACT GAACAATACT GGCTCGGTGA CCAATAATTA CGAGTTGAAC AACAGCGGCT TGCTGACGAA CAGCGGCACG CTGACCAACA ATTTTTTACT CAACAACAGC GGCTCTTTCA CTATCAATAA TGGCGGCTCT TTCAACAACA GCGGAGTATT GTCGGTACTG ACAAACAGCG GTTCTTTCAC CATCGATAAT GGTGGTTCGC TGACGAATTC GGGGACGATA ACGAATAGCG GCACCGGCAC GCTCAACAAT GCGGGTTCGT TGACCAACAA TTTTTTGCTC AACAACAGCG GCTCTTTCAC TATCAATAAT GGCGGCATAC TGACCAATAG CGGCTTGCTC ACCAACAACG AAAACTTCAT CAATTATGGT ACGCTGAACA ATACCAGCTC TTCAGGCGGC CTGAATTTAT CGGATTTTTT TGAAGGAACA GATATCACTA TAAACCCGGC AGACCTGATT GCTTTAATCA CAGGTGGTGG CGTCCTCTAT AATACCGATA CCCTCACCAA CAACGGTACG CTGAACAATG AGTTCGTGTT GTGGAACGAT GGCACGCTGA ACAATACCAT CACACTGAAC AACAACTTCC TGCTGGTCAA CCTTAACAAT CTCAATAACA GCGGAACCCT GACCAACGAT GGGATTCTTT ATAATAACAG CAACCTGACC AACACCGGTA TCCTCAACAA CACCGGTACC GGCTCTTTTG ACCTTACTTC GTTTTTTGAC GTTGATAACT TGACTTTCGA CTTCAGTGAT TTGTCAGGCC TTCTCAGCGG CAATGGCATC CTTTTGAACT TAACCGACGG AACAATCGAA AACAGCGGCA CGCTGAATAA CGACGGTTTT CTGATCAATC TGGGTACGCT GAACAATACC AGCCCGACCA CGCTGAACAA CAATTTCCTT CTGGTCAATT CAGGAGATCT GAACAATGAA TCTGGAGCTG AGGCATACAA CAACGGCATC ATGGTTAACC TTGGTACGTT CACCAATGCA GGCCAATTTT CCAACAGAAG CGAGGTTCCG GATCTTGTTT CCGAGCTGAC ATCCCTTGAC CCCGACAATC TGCTCGGTGA CATCGTTTCC ACGTTGACCA GCGGGATCAT GGTCAATCTT GATAAAGTGG AGAACTCCGG CACGTTTGAC AATAACTTTG TTTTTGCCAA CATCGGTTCT TTTGAGAACC AAAGCGGCGG AGAGCTGAAC AACAACTTCC TGCTCGTCAA TGCCGACAAC CTGTGGAATC AGAACGGTGG CAGCATGACC AACAGCGGCC TCTTCCTGAA CTTCGGTTCA TTCGCCAACG ATGGCACGCT TGATAACAAC GGCCCGATCG GCGCATTGTT CTCTGGCAGC CCGTTCTCGC TGAACACCGA GACTCTCGAC AACCCGCTGC AGCTCGGAAC GATTTACAAC GGCGGCACTA TCGACAATAC CGGCGACTTC ACCAACCGCT TCATCGTTTA CAACGACGGA CAGATGAACA CCAGCGGTAC CTTCGAGAAC CAGTTCCTGC TCGTCAATGC CGACAACCTG TGGAATCAGA GCGGCGGCAA CATGACCAAC AGCGGCCTCT TCCTGAATTT CGGTTCATTC AACAACGAAG GCACGCTTGA CAACAACGGC CCGATCGGCG GCGCATTATT TTCGGGCAGC GCATTTGCTC TCGATGCAAA TACGCTCGAC AACCCTCTGC AGCTCGGAAC GATCTACAAC GGCGACACGC TCGACAATAC CGGCATCTTC ACCAACCGCT TCATCGTCTA TAACGACGGA CAAATGAACA CCAGCGGCAC GTTCGATAAC CAGTTCCTGC TTGTCAATGC CGACAACCTG TGGAATCAGA AAGGCGGCAG CATGACCAAC AGCGGCCTCT TCCTGAACTT CGGTTCATTC ACCAACGACG GTACGCTTGT CAACAATGGC CCCGTCAACA CATCGTTTGC AGGCAGCGCA TTTGCTCTCG ATGCAAATAC GCTCGACAAC CCTCTGCAGC TCGGTGCTAT CTACAACGGC GGCACGCTCG ACAATGCCGG CATCTTCACC AACCGCTTCA TCGTCTATAA CGACGGACAG ATGAACACCA GCGGCACGTT CGATAACCAG TTCCTGCTCG TCAATGCCGA CAACCTGTGG AATCAGACAG CCGGCAACAT GACCAACAGC GGGCTCTTCC TGAACTTCGG CTCATTCACC AACGACGGTT CGCTTGTCAA CGAGGGTCCG TTCGGCGCAT CGCTTGCAGG CAGCGCATTT GCACTCAACT CCAATACGCT TGACAACCCG CTGCAGCTCG GTGCTATCTA CATCGGCGGC GAGATGAACA ATATCGGCAC CTTCACCAAC CGGTTCATCA TGTACAATGA CGGACAAATG AACACCAGCG GCACGTTCGA TAACCAGTTC CTGCTCGTCA ATGCGGACAA CCTGTGGAAT CAGACAGCCG GCACCTTGAC GAACACCGGC CTCTTCCTGA ACTTCGGCAC ACTCAACAAC GACGGTTCGC TTGTCAACAA TGGCCCCGTC AACACATCGT TTGCAGGCAG CGCATTTGCT CTCGATGCAA ATACGCTCGA CAACCCTCTG CAGCTCGGTG CTATCTACAA CGGCGGCACG CTCGACAATG CCGGCATCTT CACCAACCGC TTCATCGTCT ATAACGACGG ACAGATGAAC ACCAGCGGCA CGTTCGATAA CCAGTTCCTG CTCGTCAATG CCGACAACCT GTGGAATCAG ACAGCCGGCA ACATGACCAA CAGCGGGCTC TTCCTGAACT TCGGCACACT CAACAACGAC GGTTCGCTTG TCAACAATGG CCCCGTCAAC ACATCGTTTG CAGGCAGCGC ATTTGCTCTC GATGCAAATA CGCTCGACAA CCCTCTGCAG CTCGGTGCTA TCTACAACGG CGGCGAGATG AACAATATCG GCACCTTCAC CAACCGGTTC ATCATGTACA ATGACGGACA GATGAACACC AGCGGCACGT TCGATAACCA GTTCCTGCTC GTCAATGCCG ACAACCTGTG GAATCAGACA GCCGGCAACA TGACCAACAG CGGGCTCTTC CTGAACTTCG GCTCATTCAC CAACGACGGT TCGCTTGTCA ACGAGGGTCC GTTCGGCGCA TCGTTGCCTG AGAATGTCTT GACGTTTACA GAAAGTGATC TTGACAATCC GATCCAGCTC GGTGCTATCT ACAACGGCGG CAACATGACG AATTCCGGAA CCTTCGAAAA CGGGTTCCTG CTGGTCAACG CCAACGAGCT ATGGAACAAG GAAGAGGGCA CCATAACGAA CACTGGCCTG ATTCTGAACT TCGATACGCT GACCAACGAC GGCACGCTTG TCAACAATGG CTCGTTGGTC AATACCGGTG AGATAAACAA TAATGGCACC CTTCAGGGGA ACGGCACCAT TATAGGCAAC TTCACAAATG ACGGCACCAT TGCTCCCGGA AATTCGATCG GCACACTGAC TCAATACGGC ATTTATACGC ACAACGCAAA GGCGGTTTAT GCTCTCGATG TAAACAGCAA CGGCAATTCG GATCTGATCG AGGTCAAGGA TGTATTGATC TTCATTGGCG GCAAAACATA CTTGAAAGGC GGTATTGTGA ATGTTACGCC TGAACCCGGG GACTACAGGT GGGGCACATC ATACACGATT GTCACCACCG ACAAAGGAGT TGTCGGCACA TTCGACGATG TCGAATTCCC GCTGGCCGCT CCGTTCCTTG CGCCATCGTT ACGTTACACA AACAGAAACG TCTATCTGGA TCTCATTTCA AACTTCACCC CTTCGGCACA AACCGATAAT CAGCATGCAG TCGCATCAGC TCTTGACTCC GTTCCGGTTT CAATACATGG CGACATGGCT GACGTCATGA ACTGCATGGT CTATCTGCCG ACCGAAAATG CCGCGCTCAT GGCGATCGAC CGCATCAGCG GACACATTCA CGCTGCGCTT CCCGAAGCCA CGCTCTACTC GGTCGATCGA TACCTCGGTG CCGTATCAGG CCATTTCGGC GGATTCAGCA TGAATGATAA ACAAGGCATC GAAAGCGGAT TCTGGAGCAG CGGATTCGGC GGCTGGGGCG ACCGTGAGGG CTCGGAAATC GGTTCACGAT ACGCTTATGA CCTTACCGGC GGAATTTTCG GATATGACCA CAAACTCAGC GAAACCCTGT TGCTCGGTGC ATCTGTCGGT TACGCATCGA TGGATCTATC CATGGATGAT CTCAGCGAAA ACGCCGATGC GGAAAGCTGG CAGGGTGCTA TCTATGGCCT TTACAAAGAC GGCCCCATCC ATGTCGGCCT TATCGGGTCC TATGGCAGCC ACGACTACAA GACCACAAGA AATATCGATT TCTCATGCGT CAATCGTACA GCTGCGGCTG ATTACAACGC CTACGACCTG AGCGCGCACC TTGAAGCCGG ATACCGCATC GACACCGGTA AGAATACCTA TGTCATGCCT ACCGCCTCCT TGCAGGCTAT CTGGCTGAAC CGTGATGCGT TCACCGAAAA CGGGGCCTCC GCGCTGAACC TCATCGTCGA CGAGGAGCAG ACCACATCGA TTCCCGGTCG GATCGGGCTG ACCTTCGGCG GAGAAACCAC GAATAGGAAT GGAGGAAAAT TCACTCCTGA AGTCCGGGTC GCCTGGCGTC ACGAATTTGC GGCCGACAAT CAGTACTCGC ACCAGGCATC GTTTGCCGGA GCGCCTGCAC AATCATTCTT CATCAAAGGC GATGGCGTGA AGCGCGACAG CTTCGAAGCA GGCGCTACGC TTGCTTACGA GACGAAGTCA GGTACCAGTG TTTTTGTTTC CTATGATGCC AATCTTGCCG GCGATATGAA CGAACAAACG GCAGCATTCG GTTTCCGTTA TACATGGTAA
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Protein sequence | MSLRRIPTLS SGITDRSERK KQARPSGRSG IRLCLLLALL CHTGIPESAS GEYLKANYSS PIKLNESTAY ENKKNVVQYQ DVTITENGAV DTWNTTEIKI GGLGKKLSIN GTLYNNGSLS NNAFSTAKIN IGSTGILNNT GSVTNNYELN NSGLLTNSGT LTNNFLLNNS GSFTINNGGS FNNSGVLSVL TNSGSFTIDN GGSLTNSGTI TNSGTGTLNN AGSLTNNFLL NNSGSFTINN GGILTNSGLL TNNENFINYG TLNNTSSSGG LNLSDFFEGT DITINPADLI ALITGGGVLY NTDTLTNNGT LNNEFVLWND GTLNNTITLN NNFLLVNLNN LNNSGTLTND GILYNNSNLT NTGILNNTGT GSFDLTSFFD VDNLTFDFSD LSGLLSGNGI LLNLTDGTIE NSGTLNNDGF LINLGTLNNT SPTTLNNNFL LVNSGDLNNE SGAEAYNNGI MVNLGTFTNA GQFSNRSEVP DLVSELTSLD PDNLLGDIVS TLTSGIMVNL DKVENSGTFD NNFVFANIGS FENQSGGELN NNFLLVNADN LWNQNGGSMT NSGLFLNFGS FANDGTLDNN GPIGALFSGS PFSLNTETLD NPLQLGTIYN GGTIDNTGDF TNRFIVYNDG QMNTSGTFEN QFLLVNADNL WNQSGGNMTN SGLFLNFGSF NNEGTLDNNG PIGGALFSGS AFALDANTLD NPLQLGTIYN GDTLDNTGIF TNRFIVYNDG QMNTSGTFDN QFLLVNADNL WNQKGGSMTN SGLFLNFGSF TNDGTLVNNG PVNTSFAGSA FALDANTLDN PLQLGAIYNG GTLDNAGIFT NRFIVYNDGQ MNTSGTFDNQ FLLVNADNLW NQTAGNMTNS GLFLNFGSFT NDGSLVNEGP FGASLAGSAF ALNSNTLDNP LQLGAIYIGG EMNNIGTFTN RFIMYNDGQM NTSGTFDNQF LLVNADNLWN QTAGTLTNTG LFLNFGTLNN DGSLVNNGPV NTSFAGSAFA LDANTLDNPL QLGAIYNGGT LDNAGIFTNR FIVYNDGQMN TSGTFDNQFL LVNADNLWNQ TAGNMTNSGL FLNFGTLNND GSLVNNGPVN TSFAGSAFAL DANTLDNPLQ LGAIYNGGEM NNIGTFTNRF IMYNDGQMNT SGTFDNQFLL VNADNLWNQT AGNMTNSGLF LNFGSFTNDG SLVNEGPFGA SLPENVLTFT ESDLDNPIQL GAIYNGGNMT NSGTFENGFL LVNANELWNK EEGTITNTGL ILNFDTLTND GTLVNNGSLV NTGEINNNGT LQGNGTIIGN FTNDGTIAPG NSIGTLTQYG IYTHNAKAVY ALDVNSNGNS DLIEVKDVLI FIGGKTYLKG GIVNVTPEPG DYRWGTSYTI VTTDKGVVGT FDDVEFPLAA PFLAPSLRYT NRNVYLDLIS NFTPSAQTDN QHAVASALDS VPVSIHGDMA DVMNCMVYLP TENAALMAID RISGHIHAAL PEATLYSVDR YLGAVSGHFG GFSMNDKQGI ESGFWSSGFG GWGDREGSEI GSRYAYDLTG GIFGYDHKLS ETLLLGASVG YASMDLSMDD LSENADAESW QGAIYGLYKD GPIHVGLIGS YGSHDYKTTR NIDFSCVNRT AAADYNAYDL SAHLEAGYRI DTGKNTYVMP TASLQAIWLN RDAFTENGAS ALNLIVDEEQ TTSIPGRIGL TFGGETTNRN GGKFTPEVRV AWRHEFAADN QYSHQASFAG APAQSFFIKG DGVKRDSFEA GATLAYETKS GTSVFVSYDA NLAGDMNEQT AAFGFRYTW
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