Gene Cpha266_1151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1151 
Symbol 
ID4570940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand+ 
Start bp1297308 
End bp1297799 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content49% 
IMG OID639765744 
Productputative transcriptional regulator 
Protein accessionYP_911612 
Protein GI119356968 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.796033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGAATC CCGATACCTT CGCGCCCTAT CCAAAAAATC CGGTGATCGG TGCGTTTTTC 
AGGGAGATAG ACCGCGCTGA CGAACTTGGT TCCGGTATGC GCAAGATGAT GATGTACGGC 
AAAAAGTACG GCGGAGCGGA CCCTCAGCTC ATCGAGGGTG ACGTTTTTCG CATGATTATC 
AGTGTGCCGG AATTTGGCGA AAAACCTTCA AACACTCCTG GACGTGAGCC AGCAGCAGTT 
TCCTCGGGGC CAGAGTCGGG GCCAGAGTCG ATTTTTGAAA GAGTTATCAG GGAGTTGCCT 
ATCGGTTCTC GATCAAAATC CGAATTGGTT GCTGCGCTTG GCCACAAATC GGTATCGGGA 
AAACTGAATG AACGAATCCG TGAAATGGTT GCTGCTGGTT TGATTGCACA GACCATTCCT 
GACAAGCCAA CAAGCCGATT GCAAAAATAT TGTCTGACTG AAAAAGGTCA AAAACTGTTG 
GAGAAAAGAT GA
 
Protein sequence
MLNPDTFAPY PKNPVIGAFF REIDRADELG SGMRKMMMYG KKYGGADPQL IEGDVFRMII 
SVPEFGEKPS NTPGREPAAV SSGPESGPES IFERVIRELP IGSRSKSELV AALGHKSVSG 
KLNERIREMV AAGLIAQTIP DKPTSRLQKY CLTEKGQKLL EKR