Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_1100 |
Symbol | |
ID | 4570140 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 1245802 |
End bp | 1246512 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639765697 |
Product | ABC transporter related |
Protein accession | YP_911565 |
Protein GI | 119356921 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGACA GGATTATTGC ACAACTGATA AATGTCTCGA AATATTACGG CAGCGGAGAA GGTCGTGTTA CCGCGCTCAA TCATGTCAAT CTTTCTTTTT TTCGAGGAGA TATCGTCGTC CTTGTCGGAC TGTCAGGAAG CGGCAAATCA ACCCTGCTTC ATCTTCTTGG CTGCATTGAC AAGCAGGATG AGGGGAACGT CATCATCGAC GGCATTGATA CCTCATCAAT GAGCCTCGAA CAACTCGCGA ATCTGCGGCT TAGCAAGATC GGGTTTGTCT TTCAGTCATT CAATTTAATT CCGGTTCTTA CGGCTTATGA GAATGTCGAA CTCCCTCTTC TTTTTAAAGA CATGGATAAA AAGAGTATCC GCCAAAGAGT CGATGAAGTG CTTGACGAGG TAGGGCTTCA TGACAGAAAA CACCACTATC CAAGAGAGAT GTCTGGCGGA CAGCAGCAAA GGGTTGCCAT TGCAAGGGCT CTGGTAAGTA AACCCGCTCT GATTCTGGCA GATGAACCGA CAGCCAATCT TGACAGTAAA ACAGGTGCCG GGATTCTTGA TCTGTTGATG AGCCTCAACA AGAAGGAACA TATCACCATC GTTGTCTCTT CTCATGATTC TGTCGTGCTC GACAGAATAA AAAGCGTTGT TCATATCAGG GACGGAAAGA TAATGGTTGA CGAAACAGCT CTTCACAACC ATCTGGCCTG A
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Protein sequence | MNDRIIAQLI NVSKYYGSGE GRVTALNHVN LSFFRGDIVV LVGLSGSGKS TLLHLLGCID KQDEGNVIID GIDTSSMSLE QLANLRLSKI GFVFQSFNLI PVLTAYENVE LPLLFKDMDK KSIRQRVDEV LDEVGLHDRK HHYPREMSGG QQQRVAIARA LVSKPALILA DEPTANLDSK TGAGILDLLM SLNKKEHITI VVSSHDSVVL DRIKSVVHIR DGKIMVDETA LHNHLA
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