Gene Cpha266_1081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_1081 
Symbol 
ID4570025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand- 
Start bp1222197 
End bp1223156 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content46% 
IMG OID639765678 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_911546 
Protein GI119356902 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.763747 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGATT CCGACCGGCA AAAAACGATT CTCGCCATTC TGGGGCCTAC CGCATCCGGA 
AAATCGGCAC TCGCCTTCAG CATAGCAAAA GAGATAAACG CAGAGATCAT CTCCGCCGAC 
TCAAGGCAAA TTTATCGTGA ACTGAATATC GGTACCGCAA AACCATCTCA AGAAACACTG 
CGGCAGATAA AACACCACTT TGTTAATGAA TTATCCATAG GCGACCCCTT TACAGCCGGA 
AATTTTGCCA GAGAGGCATC AGCAAGAATC CGGAACATTC TCCATTCAGG AAAAAATGTC 
CTTATTGCCG GAGGCTCAAC CCTTTATCTT GAAGCTTTGC TCAATGGATT TGCCGATCTG 
CCGCCTGCTG ATACAGAAAA AAGACAACAA CTTGCCATTG AACTTGAAAC CTTCGGAAGC 
AAGCACCTGT TTGAACGTCT CAGGCAACTT GACCCTCTGC AGGCGGCAAC GCTTGATCAC 
ACCAAAACCC AACGACTGGT AAGAAGTCTT GAAATAATTG AACTGAGCGG GCATACCGTC 
ACAGAGATGC AGAAAAAGCA TATTCAGCCT CTTGCCGACA TCAACGTCAT CACCTGCGGA 
CTCTCATTGC CGCGACCACT GCTTTATGAA AAAATAAACA GGAGAACCGA CCAGATGCTT 
GCCTCGGGAC TTCTGCAGGA AGCGGTAGCC CTCTTTACCA AATACTACCC ATATTGCGAT 
GTAATAACAA CAAATGCGCT GCAAACGGTA GGGTATCAGG AACTCTTTGC ATACCTTGAT 
GAAAAAACTG ATTTCAAGAC CGCAATTACC CTGATTAAAC AGCATACGCG TAATTATGCA 
AAACGCCAGT TGACTTTTTT TAAAAATAGG CTTAACGTTA ACTGGATGGA TGCTCCCGAA 
AATGAACATG AGCTCTCCAT GTTAACCACC TCATGTTGCA GGATGATTAC CGGAAACTGA
 
Protein sequence
MHDSDRQKTI LAILGPTASG KSALAFSIAK EINAEIISAD SRQIYRELNI GTAKPSQETL 
RQIKHHFVNE LSIGDPFTAG NFAREASARI RNILHSGKNV LIAGGSTLYL EALLNGFADL 
PPADTEKRQQ LAIELETFGS KHLFERLRQL DPLQAATLDH TKTQRLVRSL EIIELSGHTV 
TEMQKKHIQP LADINVITCG LSLPRPLLYE KINRRTDQML ASGLLQEAVA LFTKYYPYCD 
VITTNALQTV GYQELFAYLD EKTDFKTAIT LIKQHTRNYA KRQLTFFKNR LNVNWMDAPE 
NEHELSMLTT SCCRMITGN