| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_1050 |
|---|
| Symbol | |
|---|
| ID | 4571012 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 1189384 |
|---|
| End bp | 1190142 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639765653 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_911521 |
|---|
| Protein GI | 119356877 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.61812 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTCA GGAACAAAAC CGCTCTGGTA ACCGGAGCCG CCGGTGGCAT AGGCAGCGCA
ACGGCAGTAT GTTTTGCCAG AGAGGGCGCG TTTGTCGTTC TCAGCGATAT TCGCGAAGAA
GGCTGTTTGC AGGTTCTTGA TACGATCAGG GTTGCAGGAG GCGATGGTGC GGTTATTCCG
GCAGAGATGA CCAGCGAAAA GGATATCGTG TCGCTTTTTC AACAAACTGC GAGCCTGAAA
GGACGGCTTG ACATTCTTGC TGCCATAGCC GGAGGTGATG TTGAGCCGGC AGCTTTGCCT
GAGACGATCG ATGGAGATAA ACTCAGCCTT AATCTCGATC TGAATCTCAA ATCATGTATG
CTTTGCTGTC GTGAGGCGGT AAAGATCATG AAACCGCAGC AGTATGGACG GATCGTGACC
ATGAGTTCAC TGGTTTATCG CGGAAGTCCC AATCAGTTTT CCTACGCTGC GTCGAAAGGC
GGGATCCATG CATTCAGCCG GTCACTCGCT ATGGCACTCG GCAGTTACAA TATTACTGTC
AATGCCCTTG CACCTGCACT GGTCGAGGTT CCAGCCTTTA TACAGGCGCT TGGACGTGAG
CGTTGGGAAG CGCTGAAGCG CGATTGTGCA ATGCGCTACC CTTTACAACG GATAGCTCAG
CCCGGTGATG TTGCTCTTTG CGCACTGTTT CTCGCTTCGG ATGATGCATC GTTCATTACC
GGCCAGATTC TTGAAATCTC CGGAGGCGCA AGGCTTTAA
|
|---|
| Protein sequence | MRLRNKTALV TGAAGGIGSA TAVCFAREGA FVVLSDIREE GCLQVLDTIR VAGGDGAVIP
AEMTSEKDIV SLFQQTASLK GRLDILAAIA GGDVEPAALP ETIDGDKLSL NLDLNLKSCM
LCCREAVKIM KPQQYGRIVT MSSLVYRGSP NQFSYAASKG GIHAFSRSLA MALGSYNITV
NALAPALVEV PAFIQALGRE RWEALKRDCA MRYPLQRIAQ PGDVALCALF LASDDASFIT
GQILEISGGA RL
|
|---|
| |