| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0572 |
|---|
| Symbol | |
|---|
| ID | 4569167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 643595 |
|---|
| End bp | 644353 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639765170 |
|---|
| Product | RNA methyltransferase |
|---|
| Protein accession | YP_911052 |
|---|
| Protein GI | 119356408 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGAAAG AAAAAGATAT GGAGCAGCAG GAAAAAGTTG TTTATGGCAG AAACGCCGTG
CTTGAGCTGC TTCTGAAGAA ACCGGACAGC ATTGAGAAAA TATATTTTCA GTTTAATACT
TCGCATCCGA AACTGAAAGA GATCCTTGTC AGCGCCAGAA GACAGAAACT GGTTACTGGC
AAGGCCCGGC TGGAACGACT CTCCCTTATG GCAGGAACGA CAAAACATCA GGGGGTCTGT
GCGCTTGTCA GCGCGGTATC GTATTACACC ATTGAAGAGG TGCTTGACAA GCCGAGAAAT
ACCTTCCCTC TGCTGCTGAT TCTTCAGGGT CTGGAAGATC CGCACAATAT CGGTGCAATT
ATAAGAACCG CTGAGGCTGT TGCTGCCGAT GCTGTTTTGC TGATTGAAGG CAAGGGGTCG
CCAGTCAATG CCACGGTGCA CAAAGCCTCG GCAGGGGCGC TCTCCCACAT GAGAGTGTGC
AAGGTGAAAA GCCTGGTTCG TTGTCTTGAA TTTCTTCACG AGAGAAAATT TCTCATTATC
GCTGCCGATA TGGATGCCGA GATCAATTAT ACGGATATCG ACCTTACCAA AGCGTTGGCG
ATAGTGCTTG GTGCTGAGGG GAGCGGTCTT GCTCCGGAAG CTGTAAAATT CTGTGATCAT
ACGGTGCGAA TTCCTATGGC AGGCTGCGTG GAGTCTCTTA ATGTCAGCGT TACAGCGGGA
GTATTGCTTT ATGAAGCAAT GCGCCAGCGT CTTGCATAG
|
|---|
| Protein sequence | MEKEKDMEQQ EKVVYGRNAV LELLLKKPDS IEKIYFQFNT SHPKLKEILV SARRQKLVTG
KARLERLSLM AGTTKHQGVC ALVSAVSYYT IEEVLDKPRN TFPLLLILQG LEDPHNIGAI
IRTAEAVAAD AVLLIEGKGS PVNATVHKAS AGALSHMRVC KVKSLVRCLE FLHERKFLII
AADMDAEINY TDIDLTKALA IVLGAEGSGL APEAVKFCDH TVRIPMAGCV ESLNVSVTAG
VLLYEAMRQR LA
|
|---|
| |