| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0541 |
|---|
| Symbol | |
|---|
| ID | 4569078 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 595389 |
|---|
| End bp | 596792 |
|---|
| Gene Length | 1404 bp |
|---|
| Protein Length | 467 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639765140 |
|---|
| Product | bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase |
|---|
| Protein accession | YP_911022 |
|---|
| Protein GI | 119356378 |
|---|
| COG category | [I] Lipid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase |
|---|
| TIGRFAM ID | [TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase
[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00572475 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCATTC ATCAGCGTAC ACTTCAAAAA GAGGTCTCTC TGCGGGGTAC CGGCCTGCAT
ACCGGAAAGG AATGCAGAAT CACCTTTAAA CCTGCTCCGG TAAACTACGG GTACCGCTTT
ATCCGTTCCG ATATTGAAAA CAGTCCGGAA ATACCCGCAC TTATCGACAA TGTAGTCGAC
GTGCTTCGTG GAACAACCAT CGGTATCAAC GGCGTCAATG TCCACACCAC CGAACATGTG
CTCGCAGCGC TCTACGGCCT TCAGATTGAT AACTGCTCGA TCGAAATGAG CGGCCCCGAA
CCCCCCGTAA TGGATGGCAG CTCCCTGCCG TTTGCCGAAG CTCTGCTCAG TGCAGGCATT
GCAAAACAGG ATGAGCCGAA AAATTATCTT GTCATTGATG AAACCGTCGA GTTCCATGAC
ACAGTCAACA CCGTTGATAT CGTTGCCCTC CCGCTCGACA GCTTCAGGGT CACCGTGATG
GTGGATTACA AAAACCCGGC GCTCGGATCA CAGCACTCGG GGCTGTTTGA CCTTGAAAAA
GAGTTTCTCA AAGATTTTGC GCCATCAAGA ACATTCTGTT TTCTGAGTGA AGTCGAAACC
CTTGCAAACC AGGGCATTAT CAAAGGAGGC GATATCGATA ACGCCGTTGT CATTGTCGAT
AAATCCATGA ACAACGAGGA ACTGCAAAGC CTTGCAGGAA AACTCGATCT TGAGCATGAT
CATCTTGCCA TAGGTGAAAA CGGCATTCTC AACAACAGAG CGTTACGGTT CCAGAACGAA
CCTGCCCGTC ATAAACTTCT TGACCTGCTC GGCGATATCG CCCTGCTCGG CATGCCTTTA
AGAGCGCAGG TTCTTGCCGC GCGTCCCGGT CACGCATCAA ATGTTGAATT TGTCAAGCAA
CTGAAAAAAT ACGCAGACCG CAACAAACTT GCCCGGCAAT ACCAGCACGA AAAAAAGGCA
GGCGTCATTT TTGACATCAA CGCCATTCAG AACATTCTGC CTCATCGTTA TCCATTTCTC
CTGATCGACA AGATTGTTGA GTTCAAGCTT GATGAGAAAA TCGTCTCCAT CAAGAACGTG
ACCATGAACG AACCATTCTT TCAGGGCCAC TTTCCAGGAA ATCCCGTTAT GCCCGGCGTG
CTGATCATCG AAGCCATGGC TCAGACCGGA GGCATCATGA TGCTTAACGG AACCGAAAAT
ATTCAGGAAA TGCTTGTGTA TTTCATGGGC ATTGACAAAG CCCGATTCCG CAAACCGGTT
TTACCGGGAG ATACGCTCGT TATCGAAGCG GTAATGACCA ACAAGCGAAG AAGCGTATGT
CAGTTCGACG CAAAAGCATA TGTCCGCGGT GAACTTGTTT GTGAAGCGTC ACTTATGGCA
ACGGTAATGC CGAAAACAAA GTAA
|
|---|
| Protein sequence | MLIHQRTLQK EVSLRGTGLH TGKECRITFK PAPVNYGYRF IRSDIENSPE IPALIDNVVD
VLRGTTIGIN GVNVHTTEHV LAALYGLQID NCSIEMSGPE PPVMDGSSLP FAEALLSAGI
AKQDEPKNYL VIDETVEFHD TVNTVDIVAL PLDSFRVTVM VDYKNPALGS QHSGLFDLEK
EFLKDFAPSR TFCFLSEVET LANQGIIKGG DIDNAVVIVD KSMNNEELQS LAGKLDLEHD
HLAIGENGIL NNRALRFQNE PARHKLLDLL GDIALLGMPL RAQVLAARPG HASNVEFVKQ
LKKYADRNKL ARQYQHEKKA GVIFDINAIQ NILPHRYPFL LIDKIVEFKL DEKIVSIKNV
TMNEPFFQGH FPGNPVMPGV LIIEAMAQTG GIMMLNGTEN IQEMLVYFMG IDKARFRKPV
LPGDTLVIEA VMTNKRRSVC QFDAKAYVRG ELVCEASLMA TVMPKTK
|
|---|
| |