| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0047 |
|---|
| Symbol | |
|---|
| ID | 4571238 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | - |
|---|
| Start bp | 49083 |
|---|
| End bp | 50054 |
|---|
| Gene Length | 972 bp |
|---|
| Protein Length | 323 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 639764648 |
|---|
| Product | muramoyltetrapeptide carboxypeptidase |
|---|
| Protein accession | YP_910541 |
|---|
| Protein GI | 119355897 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTCGGC ATTTTTTTGC CTGTATGAAA ACCCTTCTGC CAAAAGCACT CCGCAAGGGA
GACACCATAG GCCTGATCTC CCCATCATCG CACTCGGCTT TTCCTGAAAG AATCGCACGG
GCAATCCTGT ATCTCGAAGA ACGATCCTTC AAGGTAAAGC CCTCAACGTA CCTCAACTGC
ATTGACGTCA ACCCGGCCAT TGCCGACCAG CAGAAACTCA GCGACCTTCA CGCCATGTTC
GAAGATACCG AAGTCGATGC GGTTATCTGT CTGAGGGGAG GGGCTGGCGC CACCCGGCTG
CTGAAGAATA TCGATTATGC CCTCATCGAA GCAAATCCGA AAATCCTTAT CGGTTATTCT
GATATCACAG CGCTCTCCCT TGCCATTTTA GCGTATACAG GGCTGGTCAG TTTCTCCGGC
CCGATGATCG CCACAGAACT GTATGAACCG ACGCCATATA CCGAAGAGCA CTTCTGGGGC
ATGCTCACAG ACCCTCGATA TGCGCTTTCG CTCAAAAACC ATAGCCAGCA CAGGGTGACC
TGTCTCAAGC CGGGAGATGC TTCAGGAAAC CTTATCGGCG GAAACCTCTC CGTTCTCTGC
TCGCTGATCG GCACCCCCTA TCTCCCCATC CTTGACGATG CGATCCTTTT CCTCGAAGAT
GTCAATGAAC CGGCTTATCG GATAGACCGT ATGCTCTCGC ATCTCCTTAA TGCGGGCCTG
CTCTCCCGAT GCAGGGCGAT TCTGTTCGGT CAGTTTACCG GCACCCCGGA AAAAGCAGGA
GAAGATACCC GGCTCGAACA TATTTTTGAC TACTACGCCA CGCAAGCTCA CATAGAAGGT
CCGGTCATGA CAGGACTCTC TTACGGTCAC ATAGCCGATC TCATGACGCT CCCCCTTGGA
GCTCCGTTCC AGGTAACCGT ACGACCCCGA TATTTTTCCC TTGAGGCGCG TTATCCGGTG
ATTCATGCAT AA
|
|---|
| Protein sequence | MPRHFFACMK TLLPKALRKG DTIGLISPSS HSAFPERIAR AILYLEERSF KVKPSTYLNC
IDVNPAIADQ QKLSDLHAMF EDTEVDAVIC LRGGAGATRL LKNIDYALIE ANPKILIGYS
DITALSLAIL AYTGLVSFSG PMIATELYEP TPYTEEHFWG MLTDPRYALS LKNHSQHRVT
CLKPGDASGN LIGGNLSVLC SLIGTPYLPI LDDAILFLED VNEPAYRIDR MLSHLLNAGL
LSRCRAILFG QFTGTPEKAG EDTRLEHIFD YYATQAHIEG PVMTGLSYGH IADLMTLPLG
APFQVTVRPR YFSLEARYPV IHA
|
|---|
| |