Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0041 |
Symbol | dapD |
ID | 4568929 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 42441 |
End bp | 43304 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639764642 |
Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
Protein accession | YP_910535 |
Protein GI | 119355891 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAAGCT ATGCTTCATT GAAAGAGGAA ATATCGGGTC TGGCTCCCCT CAGTGCCGTT CAGCTTGCTG ACTATCCCGA TGCCCGCAGG GTATTCGATG ATTTCAAAAA GCTGCTTAAT GCCGGAACAG TACGGGCAGC AGAAAAAAAA GAGGGAGAGT GGCAGGTCAA TTTGTGGGTC AAGGAGGGTA TTCTGCTTGG CATGCGTCTT GGCAGACTTG TCGAAAGCCA TCTTGTTTTT CCTGAAACCG GAGGCGGCTT TGATTTTTTT GATAAGGATA CCTATCCGCT CAGGCGGATG ACGCTTGAAG ATCGGGTGCG TATCGTTCCT GGCGGATCTG CTGTCAGGGA TGGTTCTTAT CTGGCTCCTT CCGTGGTTAT GATGCCGCCG GCCTATGTCA ATGTCGGCGC GTATGTTGAC GAGGGTACGA TGATCGATTC CCACGCTCTT GTCGGGAGCT GCGCTCAGGT AGGCAAAAAT GTCCATCTGT CCGCCGGGGT TCAGGTGGGA GGCGTGCTCG AGCCGGTGGG CGCCGTTCCG GTTATTATCG AAGACGACGT TATGGTCGGC GGTAATTGCG GGATTTATGA GGGCACCATT GTCAAAGAAC GTGCCGTTAT CGGTACCGGC GTTATCCTGA ACGGATCTAC GCCCGTGTAT GATCTTGCTT TGGAAACCGT CTATCGAAAA ACTTCCGGGC ATCCGCTTGT TATTCCTGCC GGCGCTGTTG TCGTTGCGGG TTCCCGTCGG ATGAAAGGCG ACTTTGCTCT TGAGCACGGG CTGTCGCTCT ATACTCCGGT TATTATCAAG TATCGTGATG AAAAAACCGA CAGCGCTACT GCCCTTGAAC AAGCTCTGAG ATAA
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Protein sequence | MTSYASLKEE ISGLAPLSAV QLADYPDARR VFDDFKKLLN AGTVRAAEKK EGEWQVNLWV KEGILLGMRL GRLVESHLVF PETGGGFDFF DKDTYPLRRM TLEDRVRIVP GGSAVRDGSY LAPSVVMMPP AYVNVGAYVD EGTMIDSHAL VGSCAQVGKN VHLSAGVQVG GVLEPVGAVP VIIEDDVMVG GNCGIYEGTI VKERAVIGTG VILNGSTPVY DLALETVYRK TSGHPLVIPA GAVVVAGSRR MKGDFALEHG LSLYTPVIIK YRDEKTDSAT ALEQALR
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