Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0040 |
Symbol | |
ID | 4568928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 40727 |
End bp | 42424 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639764641 |
Product | ribonuclease |
Protein accession | YP_910534 |
Protein GI | 119355890 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1530] Ribonucleases G and E |
TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA GTCTGAACAA GCAATTATTA ATGAACAAGA CCGGGGATGA GATTCAGGTC GCGCTTGTTG AAGAGGGCCG GTTGGCAGAA CTGATTATTG AACGGCCGGA GAGTCGCAGA AGCATAGGTG ATATTTATCT TGGACGGGTT CATAAGGTTG TCGAAGGCCT GAAGGCCGCA TTTGTCGACA TCGGGCAGAA ATCCGACGGC TTTCTGCATT TTTCCGATGT CGGTACGACC ACTGAGGACT ATCGTGCTCT TATTGAGGAC GATGACGATG ATGATACGAC TGGAACAGAT GAGAGCGACG GCGACGAGAT TGCCGCAGTA CTATCCCAGC CCGCGGTTTT GCCGGAACAA AACGGCAAGT CTTCGGCTCG AAGCGGTGCA AAACGTCTGA CGGCTCCCGC TCAGGATGGC GAAGATGGCG GCAGGCGGCA GTCTTACACC CAGATGATTG CCGGTAAACT GAAACCCAAC GATTCGATTC TTGTCCAGGT GATCAAGGAG CCTATCAGCA CGAAAGGCTC TCGTCTTACT TCCGATATTA CCATTGCCGG ACGATTTATG GTGCTCCTTC CGTTCGGAGG AGGTCAGGTT GCGGTTTCAA GAAGGGTTAT TGCGCGCAAG GAGCGATCCC GGCTGAAAAA GCTGGTACGT TCCATGCTCC CGGATGGTTT TGGCGCCATT ATCCGTACGG TAGCGGAAAT GCAGGAGGAG ACGCTTTTGA AGCAGGATCT TGAAAAGCTG CTGGCAAAGT GGACGCAAAT CGAGGAAAAA CTTCAGGACG CTGTTCCGCC GCAGTTGATA TTCAAGGAAG ATACGATCAT TTCAAGCGTG TTACGTGATT CTCTCAATGC TGACGTGACG GAAATAGTGG CAAATTCGCC GGTCATTTAT AAGGAGACGC TGAACTATAT CCAGTGGGCC GCTCCTGAAA TGGAAAAAAA CGTTACGCTT TATCAGGGCA AGCTTCCCCT TTTTGAGGGA TACAGCATTG CCAAGGATGT TGAGTCTATC TTTTCAAGAA AGGTGTGGTT GAAATCTGGC GGATATATTA TTATCGAGCA CACTGAGGCT ATGGTTGTTA TCGATGTTAA CAGCGGACGA TATGCCGCAA AGCGGGAACA GGAGGAAAAC TCTCTGAAAA CGAATCTCGA GGCGGCTCGG GAGATTGTTC GGCAGTTGCG GCTCAGGGAT ATCGGCGGAA TCATTGTTGT TGATTTTATT GATATGCTCG ATCAGAAAAA CGCTAAAAAG GTTTATGACT CCATGCGAAC CGAGCTTCGC AATGATCGTG CGAAATCGAA TATTCTTCCC ATGTCTGATT TCGGCATCAT GCAGATTACC CGGGAAAGAA TACGACCCAG CCTTATGCAG CGGATGGGCG ATCAATGCCC TGCCTGCGGC GGCACGGGCG TCGTACAGGC GAGATTTACC ACGATCAATC AGATCGAGCG CTGGCTGAGA AAATATGCGC TTCAGAATAC CATGAAGTTG CAGCAGCTTG ATCTCTATGT CAGCCCGACT GTTGCCGAAC CTCTGCAGCA GAGCGAAATG AATACGGAAC TGAAATGGTT TCTGCAGCAT TTGCTCTTTG TTCGGGTAAA GCCGGATGAA AGTCTCCGAA GCGATGATTT CAGATTCTAC AGTAGAAAAA ACAATAAGGA GATCACCGCA GAATACGGTG ATCTCTAA
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Protein sequence | MKKSLNKQLL MNKTGDEIQV ALVEEGRLAE LIIERPESRR SIGDIYLGRV HKVVEGLKAA FVDIGQKSDG FLHFSDVGTT TEDYRALIED DDDDDTTGTD ESDGDEIAAV LSQPAVLPEQ NGKSSARSGA KRLTAPAQDG EDGGRRQSYT QMIAGKLKPN DSILVQVIKE PISTKGSRLT SDITIAGRFM VLLPFGGGQV AVSRRVIARK ERSRLKKLVR SMLPDGFGAI IRTVAEMQEE TLLKQDLEKL LAKWTQIEEK LQDAVPPQLI FKEDTIISSV LRDSLNADVT EIVANSPVIY KETLNYIQWA APEMEKNVTL YQGKLPLFEG YSIAKDVESI FSRKVWLKSG GYIIIEHTEA MVVIDVNSGR YAAKREQEEN SLKTNLEAAR EIVRQLRLRD IGGIIVVDFI DMLDQKNAKK VYDSMRTELR NDRAKSNILP MSDFGIMQIT RERIRPSLMQ RMGDQCPACG GTGVVQARFT TINQIERWLR KYALQNTMKL QQLDLYVSPT VAEPLQQSEM NTELKWFLQH LLFVRVKPDE SLRSDDFRFY SRKNNKEITA EYGDL
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