| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2176 |
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| Symbol | |
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| ID | 8368637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2591918 |
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| End bp | 2593510 |
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| Gene Length | 1593 bp |
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| Protein Length | 530 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644984630 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_003142281 |
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| Protein GI | 256821002 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.875303 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTTTAC AACAAGAAAT ACAAAAACGC CGTACCTTTG GCATCATCTC TCACCCCGAC
GCGGGAAAGA CAACCCTTAC CGAAAAACTC TTACTCTTCG GGGGGGCTAT CCAAGAAGCT
GGTGCGGTGA AATCGAATAA AATAAAGAAA GGAGCTACCT CCGACTTTAT GGAGATTGAA
CGCCAACGTG GGATTTCCGT AGCTACTTCG GTGCTGGCTT TTAACTACAA AGAGCATAAA
ATAAACATCT TAGATACCCC CGGGCACAAG GATTTCGCCG AGGATACCTT CCGCACTCTC
ACGGCTGTGG ACAGTGTAAT TGTGGTTATT GACGTTGCCA AAGGGGTGGA AGAGCAAACC
GAAAAACTCG TTGAGGTGTG CCGTATGCGC AATATTCCTA TGATTGTGTT CATTAATAAG
TTAGACCGTG AGGGGAAAGA CGCCTTCGAC CTGTTGGACG AAGTAGAACA GAAGTTGGGC
TTAAAGGTTA CTCCGCTGAG CTTTCCCATA GGGATGGGGT ATGATTTTAA AGGGATTTAT
AACATCTGGG AGAAGAATAT CAACCTTTTT TCAGGCGACA GCCGTAAGAA TATAGAGGAA
ACTATTGCCT TCAACGATAT TAACAGTCCT GAATTAGAGA AGATTATATC CGAACAATCT
GCCGAGAACC TCCGTTCCGA TTTGGAGTTA GTGTATGAAG TATATCCTAA ATTCGATAGA
GAAGCCTACC TCAAAGGAGA TCAACAACCT GTATTTTTTG GCTCGGCATT GAATAATTTT
GGGGTAAGAG AACTCTTGGA TTGTTTTGTG GAAATTGCTC CTTCGCCACG CCCGAAAGCC
AGTGAAGAGC GCATCGTAAA CCCTGAAGAA CCTACTTTTA CGGGCTTCGT TTTCAAGATT
CACGCAAATA TGGACCCTAA CCACCGCGAC CGTTTGGCGT TTGTAAAAAT TGTTTCGGGC
ACATTCGAGC GTAACAAACC TTATTTACAT ACGCGTTTGG GCAAGAAATT GAAGTTCTCC
AGTCCGAATG CTTTCTTTGC CGAAAAGAAA GAAGTGGTGG ATATCTCGTA TGCGGGGGAT
ATTGTAGGTT TGCACGATAC GGGGAACTTT AAGATAGGCG ATACACTTAC CGAAGGTGAA
GTATTGCACT TCAAGGGGAT ACCGAGCTTC TCTCCTGAGC ACTTCCGCTA CATTAACAAT
GCTGACCCAC TGAAATCTAA ACAATTAGAA AAAGGTATCG ACCAGCTAAT GGACGAAGGG
GTGGCACAGC TCTTTAAGTT AGACTTCAAC GGTCGCAAAG TAATTGGGAC GGTAGGAGCA
CTCCAATACG AGGTAATTCA GTATCGATTA GAACACGAGT ATGGGGCAAA GTGTAGTTAT
GAAAACTTCC CTATTTATAA AGCTTGTTGG GTAGAGACGC CTGAAAACCC CAAAGATGCT
GAGTATCTTG ATTTCTTACG CGTAAAACAG AAGTTCTTAG CACGCGATAA GCAGAATCAA
TTAGTCTTCT TAGCCGACTC AGCTTTCTCT ATTGAGATGG TAAAACAAAA ATATCCGGAC
TTAAAGTTGC ACTTTACATC GGAGTTTGAG TAA
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| Protein sequence | MSLQQEIQKR RTFGIISHPD AGKTTLTEKL LLFGGAIQEA GAVKSNKIKK GATSDFMEIE
RQRGISVATS VLAFNYKEHK INILDTPGHK DFAEDTFRTL TAVDSVIVVI DVAKGVEEQT
EKLVEVCRMR NIPMIVFINK LDREGKDAFD LLDEVEQKLG LKVTPLSFPI GMGYDFKGIY
NIWEKNINLF SGDSRKNIEE TIAFNDINSP ELEKIISEQS AENLRSDLEL VYEVYPKFDR
EAYLKGDQQP VFFGSALNNF GVRELLDCFV EIAPSPRPKA SEERIVNPEE PTFTGFVFKI
HANMDPNHRD RLAFVKIVSG TFERNKPYLH TRLGKKLKFS SPNAFFAEKK EVVDISYAGD
IVGLHDTGNF KIGDTLTEGE VLHFKGIPSF SPEHFRYINN ADPLKSKQLE KGIDQLMDEG
VAQLFKLDFN GRKVIGTVGA LQYEVIQYRL EHEYGAKCSY ENFPIYKACW VETPENPKDA
EYLDFLRVKQ KFLARDKQNQ LVFLADSAFS IEMVKQKYPD LKLHFTSEFE
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