Gene Coch_2115 details

Gene Information

• Locus tag: Coch_2115
• ID: 8368576
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 2535240
• End bp: 2537105
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 42%
• IMG OID: 644984569
• Product: ABC transporter related
• Protein accession: YP_003142220
• Protein GI: 256820941
• COG category: [R] General function prediction only
• COG ID: [COG0488] ATPase components of ABC transporters with duplicated ATPase domains

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.0255573
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTAC TATCCGTAGA AAATATATCA AAAGCCTTTG GCGAACGCAT AATTCTTGAA 
AACATCTCTT TTGGCATCAA TAAAGACCAA AAAATAGCCT TTATCGCTAA AAATGGTACA 
GGGAAGACTA CTTTACTCAA TATTATTGCA GGCAAAGACC AACCCGATAG CGGACAAGTA 
GTATTCCGCA AGGGCATACA TATAGGTTTT CTCTCACAAA ATCCCTCTTT TAACGAAGAA 
CTAACAGTAG AAGAGACTAT TTTCGCAACC GACAATCCTA TTTTACGATT GATTCAGGAG 
TACGAACACG CTTTACAGCA CCCTGAAAAC GAAATGGCTT ATCAAAAGGC TTTTGAACAG 
ATGGAACGCC ATAATGCCTG GGATTTTGAA ACACAATACA AACAAATACT CTTCCGTCTA 
AAATTAGACA ACCTCCAACT GAAAGTGAAA AACCTTTCGG GAGGACAGAA AAAGCGTCTC 
GCCTTAGCCA ATGTACTTAT TAGCAAACCT GACTTGCTGA TATTGGACGA ACCTACGAAT 
CACCTCGACT TAGAAATGAT TGAATGGTTA GAGCAGTACT TTGCCAAAGA AAACCTCACA 
CTCTTCATCG TTACACACGA CCGTTATTTC TTGGAACGCG TGTGCAATGA AATCCTGGAA 
TTGGACAATG GCGAACTATT CAGCTACAAA GGGAACTACT CCTATTTCTT AGAGAAAAAA 
GAACAGCGAT TAGCACAAGA GCAGGCTTCG GTAGAGAAGG CTAAAAACCT TTATGTAAAG 
GAACTCGACT GGATGCGTAG GCAACCTAAG GCACGGACTA CCAAATCGAA ATCGCGTATA 
GACGATTTTT ATAAGATAAA GGAGGCAGCC CACAAGCGTC GGAAGGAGCA CTCGGTACAG 
CTCGAAATCA ATATGGAGCG ATTGGGAAGC AAGACGGTGG AGTTTCACAA TGTGAGCAAG 
AGCTTCGGAG ACTTGTGCGT GCTCAATAAG TTTAATTATA ATTTCTTGCG GGGCGAACGA 
GTGGGAATTA TAGGTAAGAA CGGCACGGGC AAATCCACCT TTCTCAACTT GCTCACCTCG 
TCTATCACGC CTGATAGTGG TAAAATAGTA GTGGGAGACA CTATTAAGTT CGGGTACTAT 
ACCCAAGATG GTATTGAGGT ACAACAAGGA CAAAAGGTAA TAGAAGTGAT ACAAAAGTAT 
GGCGATTACA TTCCTCTACT TAAAGGGCGC ACTCTCTCAG CAGGGCAGCT ATTGGAACGC 
TTTCTCTTCG ACCGTAAAAA GCAATACGAC TATGTAGAGA AACTCAGCGG AGGGGAACTC 
AAACGCTTAT ACCTATGTAC TGTACTCATT CAAAACCCCA ATTTTTTGAT TTTAGACGAG 
CCTACGAACG ACCTCGATAT TGTTACTCTG AACGTCTTAG AAGACTTTTT GTTAGACTAT 
CCAGGGTGCT TGGTGGTAGT ATCACACGAC CGCTATTTTA TGGATAAAAT AGTAGACCAC 
CTTTTTGTCT TCAAAGGTAA TGGAGAAGTA GAGGATTTCC CTGGTAACTA CACCGATTAC 
CGCGTGTACG AAGAGAGCGT TCCTCCGACA GACGATGCTC CCAAGAAAGA AGCTTCCAAA 
AACACTTGGC GCAAGGACGA AACGAAAGGT TTATCGTTCA ACGAGCAGAA GGAATACAAC 
CGATTAGAAA AAGAAATAGC GCAGTTAGAA GAGAAAAAAG CTGCTATAGA AGCTACTTTT 
GCCGAAGGAA GTCTTAGCAG TAATGAAATA CAAGAACAAT CAGTAGCCTT GCAAGAGACG 
CTTATTGCGA TAGAGGAAAA GACCGAACGC TGGTTTGAAC TAACGGAGAA GCTGGAAGAA 
CATTAA 

 

Protein sequence

MNLLSVENIS KAFGERIILE NISFGINKDQ KIAFIAKNGT GKTTLLNIIA GKDQPDSGQV 
VFRKGIHIGF LSQNPSFNEE LTVEETIFAT DNPILRLIQE YEHALQHPEN EMAYQKAFEQ 
MERHNAWDFE TQYKQILFRL KLDNLQLKVK NLSGGQKKRL ALANVLISKP DLLILDEPTN 
HLDLEMIEWL EQYFAKENLT LFIVTHDRYF LERVCNEILE LDNGELFSYK GNYSYFLEKK 
EQRLAQEQAS VEKAKNLYVK ELDWMRRQPK ARTTKSKSRI DDFYKIKEAA HKRRKEHSVQ 
LEINMERLGS KTVEFHNVSK SFGDLCVLNK FNYNFLRGER VGIIGKNGTG KSTFLNLLTS 
SITPDSGKIV VGDTIKFGYY TQDGIEVQQG QKVIEVIQKY GDYIPLLKGR TLSAGQLLER 
FLFDRKKQYD YVEKLSGGEL KRLYLCTVLI QNPNFLILDE PTNDLDIVTL NVLEDFLLDY 
PGCLVVVSHD RYFMDKIVDH LFVFKGNGEV EDFPGNYTDY RVYEESVPPT DDAPKKEASK 
NTWRKDETKG LSFNEQKEYN RLEKEIAQLE EKKAAIEATF AEGSLSSNEI QEQSVALQET 
LIAIEEKTER WFELTEKLEE H