Gene Coch_2114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_2114 
Symbol 
ID8368575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2533906 
End bp2535216 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content43% 
IMG OID644984568 
ProductFe-S oxidoreductase N-terminal region 
Protein accessionYP_003142219 
Protein GI256820940 
COG category[C] Energy production and conversion 
COG ID[COG0247] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.24979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTTCT TTCCTAACAT AGTATTTATA ATACTTCTCT GTATAGGAGG AGGCTTTTTT 
ATTTATAATA TACGGAAACT CATTAGGAAT ATCCGTTTAG GCAAGCTGGA AGACACTTCT
GGCAACCGCA AAGAGCGACT CAAAAATATG TTGTGGCTCG CTTTAGGGCA ACGAAAAATG
TTGGTGCGCC CCATAGTGGG TGTTTTGCAT ATTATTGTAT ATGCAGGTTT CTTGATTATC
AACATCGAAC TTTTAGAGAT TATTACTGAC GGTATCATAG GAACCCACCG CATATTTGCC
TTCTTAGGGG TGTTTTACAA CTTCTTGATA GCTTCTTTTG AGGTATTAGC TCTCTTAGTG
ATTGTAGCAG TAACCGTATT TTGGATAAGG AGAAACGTAC TAAAACTACC ACGCTTTCGC
AAGGCAGAAA TCAGAGGGTG GGCAAAAAAA GATGCAAGCA ATATCCTTTA TGCCGAAATG
GCAATGATGA GTCTTTTCCT ACTGATGAAC GCTGCCGATG GTCAGCTACA AACATTACAC
GTAACCCACT ATGTGCAAGC AGGTTCTTTT CCTGTGAGCG AATGGTTACG CCCCTTGTTA
GGAAACGCTT CGGTAAGCAC TCTTATAGTT GTAGAACGCA GTTGTTGGTG GTTACACATT
ACTGGGGTTT TATGCTTTTT AAACTACTTA TATTACTCCA AACATCTACA CATACTGTTA
GCTTTCCCTA ATACGTACTA CGCACCTATT CGTCCGTTAG GAGCTTCTAA GGTAAACCCA
GCGGTAACAC AAGAGGTGAA ACTAATGTTA GACCCCAATG CCGACCCTTT TGCAACACCA
CAAGACACAG CCCCTCCTGA TAAGTTTGGA GCTTCGGACG TGACCGACCT CACTTGGTTA
CAGCTGATGA ACGCCTATAC TTGTACCGAG TGCGGGCGTT GTACCGATGA ATGTCCGGCG
AACCTCACCG GTAAAAAGCT TTCTCCTCGC GCGATTATGA TGAAAACACG TGACCGCTTA
GAAGAGGTAG GGCGCAATAT CGACAAACAC GGTACTTTTG AACCCGATGG CAAACAACTT
TTAGGCGACT ACATTACTCC TGAAGAACTA TGGGCTTGTA CCACTTGCAA TGCTTGTGTG
GAGGTCTGCC CTGTGAGCAT CAGTCCGTTA TCTATTATTA TGGATATGAG GCAGTATTTG
GTAATGGAAG AATCGGCAGC CCCTACCGAA CTCAATGTGA TGATGACTAA TATAGAGAAC
AACGGAGCCC CTTGGGCGTA TAGCCAAGCA GATAGAAACA TCACAAATTA A
 
Protein sequence
MSFFPNIVFI ILLCIGGGFF IYNIRKLIRN IRLGKLEDTS GNRKERLKNM LWLALGQRKM 
LVRPIVGVLH IIVYAGFLII NIELLEIITD GIIGTHRIFA FLGVFYNFLI ASFEVLALLV
IVAVTVFWIR RNVLKLPRFR KAEIRGWAKK DASNILYAEM AMMSLFLLMN AADGQLQTLH
VTHYVQAGSF PVSEWLRPLL GNASVSTLIV VERSCWWLHI TGVLCFLNYL YYSKHLHILL
AFPNTYYAPI RPLGASKVNP AVTQEVKLML DPNADPFATP QDTAPPDKFG ASDVTDLTWL
QLMNAYTCTE CGRCTDECPA NLTGKKLSPR AIMMKTRDRL EEVGRNIDKH GTFEPDGKQL
LGDYITPEEL WACTTCNACV EVCPVSISPL SIIMDMRQYL VMEESAAPTE LNVMMTNIEN
NGAPWAYSQA DRNITN