| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2109 |
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| Symbol | |
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| ID | 8368570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2525876 |
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| End bp | 2527294 |
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| Gene Length | 1419 bp |
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| Protein Length | 472 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644984563 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_003142214 |
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| Protein GI | 256820935 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCAGA TAAGTGTATT CGATATGCTA AAAATAGGGG TAGGTCCTTC CAGCTCTCAC
ACTTTAGGTC CTTGGCGTGC TGCTGAGGCT TTCCTCAAAG AATTGAGAGA GAAGCACCTC
CTAACCCGCA CAACCAAAGT GCACGTAGAT TTATACGGCT CACTCTCTCT CACAGGCAAA
GGTCACGCTA CCGATTTGGC AGTAATGTTA GGTCTCAGTG GTGCCGACCC TGAGTATGTG
CCTATCGAGA GTTTAGATGT GATTATTACG GCTATTACTA ATAATCAAGA GCTCTATTTG
GGCAATGAGA GCATCATTAG CTTCAATCCT AAGGAAGACA TTATTTTCAA TAGAGATTTT
TTGCCTTTTC ACCCCAATGG TCTTACTTTT ACAGCTGAAG GCGAGGGGTT CAGTTATGCT
TCTACTTTCT ACTCAGTAGG AGGTGGTTTT ATAGTAAAAG AAGGAGAACA AGCAACAGCC
AAGGAAGATA CTCAGCGAAA TTTCCCTTTT CCTATTGATA AAGCTGAGCA GCTCATTAGC
TATTGTTGCC AAGAAGGAAA GAAAATATCC GAAATCGTCT ATGAAAACGA AAAAGCCTTG
CGTACTGAGG AGCAAATCCA TAGCGAACTG ATGCGTATAT GGCATACTAT GTTGGAATGT
ACTTATATAG GTTGTCATAC CGAGGGTGTA CTCCCTGGCG GTTTACACGT GCGCCGTCGT
GCTTATGATA TCCACAAGAA CCTCATAGGG GTAGTAACCT ACGATAGTCC AGAGAATTGG
CTGAACTCTA TCAAGAAAAC GAATATCAAG TTTCGCGAAA TCCTTAAATG GGTAAGTTGT
TTTTCGCTGG CAGTTAATGA AGTGAATGCT TCGTTGGGGC GTGTAGTTAC GGCACCTACC
AATGGTAGTG CAGGGGTGAT TCCCGCCGTG CTACTCTACT ACATAACCAT CGAAAACCAA
CAAGCTACCG AGGAGCAGAT TCAGCAATTC CTATTGGTAG CGGGCGAAAT AGGCAGTCTC
TTCAAAAAAG GAGCAACCAT CTCAGCAGCT ATGGGCGGTT GTCAAGCCGA AATAGGTGTA
TCTTCCGCAA TGGCGGCAGG TGCGCTCTGC GAACTCTTGG GTGGTTCTCC GGAGCAGGTA
CTCATCGCTG CCGAAATAGC AATGGAACAC CACTTGGGGC TTACTTGCGA CCCTATTGGC
GGATTGGTGC AAATCCCTTG TATCGAGCGC AATGCTATGG GGGCAATCAA AGCAATTAAC
GCTGCCGAAT TGGCTATCGA AACCGACCCT AAGAATGCGA AAGTGCCCTT AGACAAGGTT
ATCAATACTA TGTGGCAAAC TGCCAAAGAT ATGAACTCTA AATACAAAGA AACCTCAGAA
GGGGGCTTAG CGGTAGCTGT AAATATGGCC GACTGCTAA
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| Protein sequence | MEQISVFDML KIGVGPSSSH TLGPWRAAEA FLKELREKHL LTRTTKVHVD LYGSLSLTGK
GHATDLAVML GLSGADPEYV PIESLDVIIT AITNNQELYL GNESIISFNP KEDIIFNRDF
LPFHPNGLTF TAEGEGFSYA STFYSVGGGF IVKEGEQATA KEDTQRNFPF PIDKAEQLIS
YCCQEGKKIS EIVYENEKAL RTEEQIHSEL MRIWHTMLEC TYIGCHTEGV LPGGLHVRRR
AYDIHKNLIG VVTYDSPENW LNSIKKTNIK FREILKWVSC FSLAVNEVNA SLGRVVTAPT
NGSAGVIPAV LLYYITIENQ QATEEQIQQF LLVAGEIGSL FKKGATISAA MGGCQAEIGV
SSAMAAGALC ELLGGSPEQV LIAAEIAMEH HLGLTCDPIG GLVQIPCIER NAMGAIKAIN
AAELAIETDP KNAKVPLDKV INTMWQTAKD MNSKYKETSE GGLAVAVNMA DC
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