| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_2106 |
|---|
| Symbol | |
|---|
| ID | 8368567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | + |
|---|
| Start bp | 2523549 |
|---|
| End bp | 2524160 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644984560 |
|---|
| Product | fumarylacetoacetate (FAA) hydrolase |
|---|
| Protein accession | YP_003142211 |
|---|
| Protein GI | 256820932 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATTA TTTGTATAGG TAAAAATTAC CGCGAGACTA TCGAAATATT TGATAAAACA
ACGGTTCAGC CCATAGTGGT ATTTATGAAG CCTGATACGG CTATTCACAA TCTTGAGATT
CCTTACTACA TTCCTGATTT TACAAAGGAT TTACACTACG AAATAGAGTT AGTACTCAAA
ATCAACCAGA ATGGAAAGTG CATTTCGGAA AAATTTGCAC ATAAGTATTA CGACGAGATT
GCGGTGGGCA TTGACTTTAC CGCTTGCGAC CTGCAAGCGG AATTGAGCCA AAAAGGACTA
CCGTGGGAGC TAGCGAAGGC TTTTGATGGC TCAGCTATCG TAGGGAAGTT TGTCTCTAAA
GAAACAATTG AGAGTTCTTC CTCTATTCAG TTTCACTTAG ATAAAAATGG CTCTACTGTA
CAAGAGGGCA ATACGACACA AATGCTTAGA AGCTTTGACG TTATCATCTC GGAGGTATCT
CAGTTCTTTA CCCTTCGCAA AGGCGACCTT ATCTTTACGG GAACACCTAA AGGTGCAGGG
AGAGTAGCAA CAGGTAATGT GTTAGAAGGA TTTTTAATGG GAGAGAAAGG ATTTAGTTTG
AAAATTAGAT AA
|
|---|
| Protein sequence | MKIICIGKNY RETIEIFDKT TVQPIVVFMK PDTAIHNLEI PYYIPDFTKD LHYEIELVLK
INQNGKCISE KFAHKYYDEI AVGIDFTACD LQAELSQKGL PWELAKAFDG SAIVGKFVSK
ETIESSSSIQ FHLDKNGSTV QEGNTTQMLR SFDVIISEVS QFFTLRKGDL IFTGTPKGAG
RVATGNVLEG FLMGEKGFSL KIR
|
|---|
| |