| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1951 |
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| Symbol | |
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| ID | 8368409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2343652 |
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| End bp | 2345841 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984402 |
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| Product | ATP-dependent DNA helicase RecQ |
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| Protein accession | YP_003142056 |
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| Protein GI | 256820777 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family
[TIGR01389] ATP-dependent DNA helicase RecQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGA CAAAAGATGA TTTACACAAT GCCCTGAAAC ACTACTTTGG GTTTGAAGCG
TTTAAAGGGC ATCAAGAAGA AATTATTACC AGTGTAATTA ATAAAGAGAA CACCTTTGTT
ATTATGCCTA CAGGTGGTGG TAAATCATTG TGTTACCAAT TACCTGCCTT AGTCTTGGAG
GGAACTGCTA TTGTTATCTC TCCGCTTATC GCTTTGATGA AAAACCAAGT AGATGCTATG
CGTGGTATTT CGTCAACTGA TAGTATTGCC CACGTGCTGA ACTCTTCGCT TACTAAAAAT
GAAATTCGCG AGGTAATGGA AGACATCAGT GCAGGCAAGA CTAAGTTGCT ATACGTTGCC
CCCGAGTCGC TTATCAAAGA GGAATATGCT AACTTTCTCA AAACAGTACC TATTTCCTTT
GTAGCGGTAG ATGAGGCGCA CTGTATCTCG GAATGGGGAC ACGATTTCCG TCCTGAGTAC
CGCAATATTA GAACCATTAT CGAGCGTTTG GGCAGTAATA TACCTATTGT AGCGCTTACT
GCTACGGCTA CTCCTAAGGT ACAAGAAGAT ATTTTGAAGA ACTTAGGAAT GCAGGAGGCT
AACGTGTTTA AGTCGTCGTT CAACCGTCCA AACTTGTATT ACGAGGTACG CCCTAAAACT
AAAAATGTAG ATGCCGATAT CATTCGTTTT GTGAAACAGA ACAGTAAAAA ATCAGGGATT
ATATACTGTC TTAGCCGTAA AAAGGTGGAA GACCTCGCAC AAACCTTACA AGTAAACGGC
ATTTCGGCAG TGCCTTATCA CGCAGGATTA GATGCCAAAA CACGCGCCAA ACACCAAGAT
ATGTTCTTGA TGGAAGAGGT AGATGTGGTA GTTGCAACTA TTGCTTTTGG TATGGGTATT
GACAAACCCG ATGTGCGCTT TGTAATTCAC CACGATATTC CTAAAAGTAT AGAGAGTTAC
TATCAAGAAA CCGGACGTGC CGGTCGTGAT GGTGGTGAAG GGCATTGCTT GGCTTTCTAT
TCCTATAAAG ATGTAGAGAA GCTGGAAAAA TTTATGATAG GCAAACCTAT AGCTGAGCAA
GAAATAGGAC AAGCACTCTT GCAAGATATT GTAGCCTATG CCGAAACGTC TAGTTCGCGC
CGTAAATTTA TCTTACATTA CTTTGGTGAA GAGTTTGACG AGGTGAATGG CGAAGGTGCT
AATATGGACG ATAATGTACG TTTTCCTAAA GAAAAGAAAG AAGCTAAAGA CGATGTGGTG
AAATTGCTAA ACGTAATTAT TGCTACCAAA CAGAAATTTA AAGCTAAAGA GATTGTAAAT
ACGCTTATTG GAAAAGTAAG TGCTATTATC AAAGCACACC GTATTGACGA ACAAGAGTTC
TTTGGTATTG GTAAGGAAAA AGACGATGCT TACTGGATGG CACTTCTCCG TCAGGTAATG
GTAAACGGAC TCATACGCAA AGATATAGAA ACTTACGGAG TGATGTTTAT CACCGACAAA
GGAAAAGAGT TTTTAAAAGA TGTACCTTCA TTTATGATGA CTGAAGACCA CAGTTATGAA
GAAGAACCCG AAGATATCAA CAGTGCTAAT GCCGTAGCAG CCGACCCTGT ACTTCTTGAA
ATGCTCAAAG ATTTGCGTAA GAAAGTAGCA AAACAAAAAG GGGTACCTCC GTTTGTGGTA
TTCCAAGACC CTTCGCTAGA AGATATGGCT CTCAAATACC CTATTACTAT TCAAGAGCTT
ACTAATGTAC ACGGTATAGG TGAAGGCAAG GCTAAGAAAT ATGGTAGTGA GTTTGTAAAG
CTCATTGAGC GTTACGTAGA AGAGAATGAC ATTGTGCGCG CTGAGGATTT AATAGTAAAA
ACTACAGGGT CTAACTCAGC TTTGAAATTG TTTATCATTC AGAATATAGA CCGCAAATTG
CCTTTGCCTG ACATCGCACA AGCCAAAGGA TTGGAAATGG ATGAGTTCCT CAAAGAAATG
GAGCAAATAG TATACAGTGG TACCAAGCTG AATATCGATT ATTGGGTGAA TGAAATCTTT
GATGAAGAGC AACAAGAAGA GCTTCACGAA TACTTTATGG AAGCTGAAAG TGATAAAATA
TCGTTAGCCT CTAAAGAGTT TGCCGGTGAT TACGAAGACG ATGAATTAAG AATCTACCGA
TTGAAATTTA TTAGTGAGGT AGCAAATTAA
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| Protein sequence | MEMTKDDLHN ALKHYFGFEA FKGHQEEIIT SVINKENTFV IMPTGGGKSL CYQLPALVLE
GTAIVISPLI ALMKNQVDAM RGISSTDSIA HVLNSSLTKN EIREVMEDIS AGKTKLLYVA
PESLIKEEYA NFLKTVPISF VAVDEAHCIS EWGHDFRPEY RNIRTIIERL GSNIPIVALT
ATATPKVQED ILKNLGMQEA NVFKSSFNRP NLYYEVRPKT KNVDADIIRF VKQNSKKSGI
IYCLSRKKVE DLAQTLQVNG ISAVPYHAGL DAKTRAKHQD MFLMEEVDVV VATIAFGMGI
DKPDVRFVIH HDIPKSIESY YQETGRAGRD GGEGHCLAFY SYKDVEKLEK FMIGKPIAEQ
EIGQALLQDI VAYAETSSSR RKFILHYFGE EFDEVNGEGA NMDDNVRFPK EKKEAKDDVV
KLLNVIIATK QKFKAKEIVN TLIGKVSAII KAHRIDEQEF FGIGKEKDDA YWMALLRQVM
VNGLIRKDIE TYGVMFITDK GKEFLKDVPS FMMTEDHSYE EEPEDINSAN AVAADPVLLE
MLKDLRKKVA KQKGVPPFVV FQDPSLEDMA LKYPITIQEL TNVHGIGEGK AKKYGSEFVK
LIERYVEEND IVRAEDLIVK TTGSNSALKL FIIQNIDRKL PLPDIAQAKG LEMDEFLKEM
EQIVYSGTKL NIDYWVNEIF DEEQQEELHE YFMEAESDKI SLASKEFAGD YEDDELRIYR
LKFISEVAN
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