| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1941 |
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| Symbol | |
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| ID | 8368399 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 2327240 |
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| End bp | 2328538 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 644984393 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003142047 |
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| Protein GI | 256820768 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA AGTTATTTTT TTTACTTTGT TTACTGCCTT TTTCAGTAGT AGCACAAAAA
CTGTGGACAT TAAGCGACTG TATTCTGTAT GCCAAAGAAA ATAACCTATC TATTAAACAA
TCGGAAATAG ATTTAAAAGC CACAGATATT GATAAAATGC AAGCCAAAGC AGGTTTCTTG
CCCTCGGTGA ATGGCAATGC ATCTTATAAC TTAAATGAGG GAAAAAATAT CAATCCTGTA
ACCAATCAGT TTGAAAATGC TTTCTTTCAA TCGGCATCAG GAGGAGTAAG CGTAGACCTT
ACTCTTTTTG CAGGACTACA AAATTGGCGC AAGTTACATC AGGCGGAACT TAATCGTATA
GCTTCTCAAT ATCAGTTAGA TAAAATGAAA GACGATATAG TACTGATGAT TATCAATGCC
TATGCTGAAG TGTTGAGCAA TAAAGAACAA ATCAAGAATT TGAAAGCACA GTTAGAAATT
TCAAAGGAAA GTTTAACGCG CACCCGTGAA CTTATTGGTG CAGGATCTTT ACCCAAAGGA
GATATTTATG AAGCCGAAGC ACAACTGCTC ACACAAGAAC AGCAAATAAT AGCAACCGAA
AACGCTCTCT TTATTGCCAA AATGGGTTTG GCACAATTAC TTTTGTTAAA AAACTATCGA
GATTTTGATA TTGCAGATAG TGCTTTTGAG CAACCTTCTG CTGATATTCT TAATAAAACT
CCTGAAGAGA TTTATGAGCG TGCCAAAGAG GTAATGAGCG ATGTAAAATT AGCCGAAGCA
AATATGCAAG TAGCTCAAAA TAGTTTGCGT TTATCACAAT CGGCTTATTC ACCGCGTCTT
TCTGCTCAAT GGGGTTATAG TTCACGATGG AGTAAGAAGC AAGCGCAAGA TTTTTGGCAA
CAACTTGATG CTAATAAAGG TATGTATGCA GGGTTATCGC TTAATATTCC TATTTTTAAC
GGATTTTCAA CTTTAGGAAC TGTAAAACGT CAGCGATTAA ATTTTTTAAA AAGTCAATTT
GCTAAAGAAC AAGCAGAACT TACTTCTGAG AAGAACATTT ATCAAGCCTA TAATGATGCT
TCGAATGCTA AAAAGCTATA TGAAGCGAGT GAAAAGACGG TACAAGCAAA ACAACAGGCG
TTTAGTTATG CGCAAGAGCG TCATAATGTA GGTTTAATGA ATACTTTTGA TTTTAGTCAA
GCTAAATATC AGTATGAGAA TGCTCAAAAC GATTTTGTTA AAGCCAAATA TCAATATATT
TTTAAGCTAA AAGTATTAGA ATATTATTTT AGTCATTAA
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| Protein sequence | MMKKLFFLLC LLPFSVVAQK LWTLSDCILY AKENNLSIKQ SEIDLKATDI DKMQAKAGFL
PSVNGNASYN LNEGKNINPV TNQFENAFFQ SASGGVSVDL TLFAGLQNWR KLHQAELNRI
ASQYQLDKMK DDIVLMIINA YAEVLSNKEQ IKNLKAQLEI SKESLTRTRE LIGAGSLPKG
DIYEAEAQLL TQEQQIIATE NALFIAKMGL AQLLLLKNYR DFDIADSAFE QPSADILNKT
PEEIYERAKE VMSDVKLAEA NMQVAQNSLR LSQSAYSPRL SAQWGYSSRW SKKQAQDFWQ
QLDANKGMYA GLSLNIPIFN GFSTLGTVKR QRLNFLKSQF AKEQAELTSE KNIYQAYNDA
SNAKKLYEAS EKTVQAKQQA FSYAQERHNV GLMNTFDFSQ AKYQYENAQN DFVKAKYQYI
FKLKVLEYYF SH
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