| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1918 |
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| Symbol | |
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| ID | 8368376 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 2304909 |
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| End bp | 2305355 |
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| Gene Length | 447 bp |
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| Protein Length | 148 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644984370 |
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| Product | transcription activator effector binding |
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| Protein accession | YP_003142024 |
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| Protein GI | 256820745 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3708] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00982966 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAATCA TCGGAATTAG TGTACGCACT ACCAATCAGA ACGGACAAGC GATGCAAGAC
ATCGGAAACC TTTGGCAACG CTTTTTTAGC GAGCAACTTT TGGCAAAAAT ACCCAATAAG
GTAAGCGATG CCATTTACAG CATCTACACC GATTACCAAA AGGACTATAC CGAGCCTTAT
ACTTGCATCA TAGGAGTGGA AGTTACCACG CTCAGCACGA TTCCCGACGG CTTAGAGGGC
AAGGAATTCC CTGAACAAAC CTTTCAAAAG TTTGTAGCCA AAGGCGCAAT GCCTCAAGCA
GTAGGGGCAA TGTGGCAACA TATCTGGGAC AACGATGCCA CACTCAATCG CACTTATATA
TATGACTATG AGTGCTACAC CGAGAAGTCT CAGCAAGGGG ATACCTCCGA AGTAGATATT
TTTATAGGCG TAAAAGAGAA CAAATAG
|
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| Protein sequence | MKIIGISVRT TNQNGQAMQD IGNLWQRFFS EQLLAKIPNK VSDAIYSIYT DYQKDYTEPY
TCIIGVEVTT LSTIPDGLEG KEFPEQTFQK FVAKGAMPQA VGAMWQHIWD NDATLNRTYI
YDYECYTEKS QQGDTSEVDI FIGVKENK
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