Gene Coch_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1911 
Symbol 
ID8368369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2299760 
End bp2300455 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content41% 
IMG OID644984363 
ProductMethyltransferase type 11 
Protein accessionYP_003142017 
Protein GI256820738 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCACAAT TCTACAATAG TATCGCTGAG AAATACGATG CTATCTTTCC GCTATCGCCT 
GCACATAAAG TCTTTTTCGA TGCCGAAGTG TACGGCAAGA CAGTTCTTGA TGTAGGGGCA
GGTACGGGCA ACCTTACCGC CTATCTGCGC GCACAGGGCT ATGATGTTAC GGCTATCGAC
CTCAGTAAGG CACTCATTGC TCAGGCTACT GCCAAGGATA TTGAAGTGCA AGAGCTCAAT
ATGCTTGCTA TCGATACTTT ACCTATGCTC GATACTATTA TCAACATTGG GAACACGCTC
CCACATTTGG ATAATAAAGA CGAAGTGCAG ACTTTTCTTA AAAAGGCTTA TAACCAACTC
ACGCAAGGAG GCAAACTTAT CTTGCAAATG GTAAACTTTG AGAAGTATTT TGCCCAGAAA
GAAGGTAATT TTCTCGGTAA CCTGCCTTTA ATAGAGAACG AAAAAGTAAA GTTTGAGCGT
TCTTATCACT TAAACCGCGA AGGGAAGGTA GTTTTTAAGA CAGTTTTGGA CGAAACTATT
GCCAATGAAG AGCTTTTACA GCCTATTCTT TCCGAAGAAC TCACCCTATG GCTCTCTCAA
ATAGGTTTTA AAGACCTTAA ACTATACGGC AACTTCAAAA AAGAGCCTTT TAATCCTGAA
ACTTCAATGG CGCTTATTGT AATAGCTCAG AAATAA
 
Protein sequence
MSQFYNSIAE KYDAIFPLSP AHKVFFDAEV YGKTVLDVGA GTGNLTAYLR AQGYDVTAID 
LSKALIAQAT AKDIEVQELN MLAIDTLPML DTIINIGNTL PHLDNKDEVQ TFLKKAYNQL
TQGGKLILQM VNFEKYFAQK EGNFLGNLPL IENEKVKFER SYHLNREGKV VFKTVLDETI
ANEELLQPIL SEELTLWLSQ IGFKDLKLYG NFKKEPFNPE TSMALIVIAQ K