Gene Coch_1847 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1847 
Symbol 
ID8368295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand- 
Start bp2209337 
End bp2210461 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content40% 
IMG OID644984289 
Product3,4-dihydroxy-2-butanone 4-phosphate synthase 
Protein accessionYP_003141953 
Protein GI256820674 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase 
TIGRFAM ID[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.355864 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAATA TTAAACTAAA CAGCATTGAA GAAGCTGTTG AAGATATAAA AAAAGGAAAG 
GTCGTTATTG TAGTAGATGA TGAAAATCGC GAAAATGAAG GCGATTTTAT TGCTGCTGCT 
GAAAAGGTAA CTCCTGAGAT GATTAATTTT ATGATTACCA ACGGTCGAGG GTTAGTCTGT 
ACTCCTCTTA CTGAAAAACG CTGTGCTGAG CTTGATCTTC CGATGATGGT GCAAAACAAC 
ACCGTACTAC ACGAGACTCA GTTTACTGTT TCAGTAGATT TAAAAGGTCA GGGTTGTACT 
ACCGGTATTT CAGCTTTCGA CCGAGCTAAA ACTATTCAAG CATTAGTAGA CCCAAAGACC 
ACTCCTTTCG ACTTAGGGCG TCCTGGACAT ATATTCCCTT TACGCGCTAA AGAAGGCGGA 
GTACTTCGCC GTACAGGACA CACAGAAGCA ACTATTGACC TCACTCGTAT TGCGGGACTA 
AAACCTGCCG GTATTTTAGT AGAAATCTTA AATGAAGATG GTACGATGGC ACGATTACCT 
CAGTTGGTGG AAGTAGCTAA GAAATTCGAC CTTAAAATCA TTTCTATTGA AGACCTTATT 
GCTTATCGTA TGCGCAAAGA CACACTTGTG ATAAAGAAAG AAGATTTCTT GTTGCAAACC 
CCTTATGGAG AATTCCGCTT GCGCGCCTAT GAACAAACTA CTAACAAGCA AATACACTTA 
GCCTTTACAC AAGGCACTTG GAAAGCAGAT GAACCTGTGC TTACGCGCGT TCATTCATCA 
TTTATCAGTA ATGATATTCT GGAAGTTATA GCAGGAGATA AGGACAACCC TCTTGAACGC 
ATTTTCAGAA AAATTAATGA GGAAGGCAAA GGAGCTGTGA TAGTAATTAA TAAAGAAGGT 
TATTCGAAAA CGTTATTACA GCACATTACC GAAATCAAAG AACACCAAAC AGGGCACCCT 
CTTCCTCAAG TAGGTAAAGA TACCAAAGAT ATTGGGATGG GAGCTCAAAT ACTCAACGAT 
TTAGGTATTA GGAAACTTCG ATTACTTACC AACTCTAAAA ATGCGTCTAA TTACGTAGGA 
ATGTCAGGCT ACGGTCTTGA AATTACGGAA GAGATACCGT ATTAA
 
Protein sequence
MNNIKLNSIE EAVEDIKKGK VVIVVDDENR ENEGDFIAAA EKVTPEMINF MITNGRGLVC 
TPLTEKRCAE LDLPMMVQNN TVLHETQFTV SVDLKGQGCT TGISAFDRAK TIQALVDPKT 
TPFDLGRPGH IFPLRAKEGG VLRRTGHTEA TIDLTRIAGL KPAGILVEIL NEDGTMARLP 
QLVEVAKKFD LKIISIEDLI AYRMRKDTLV IKKEDFLLQT PYGEFRLRAY EQTTNKQIHL 
AFTQGTWKAD EPVLTRVHSS FISNDILEVI AGDKDNPLER IFRKINEEGK GAVIVINKEG 
YSKTLLQHIT EIKEHQTGHP LPQVGKDTKD IGMGAQILND LGIRKLRLLT NSKNASNYVG 
MSGYGLEITE EIPY