Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1835 |
Symbol | |
ID | 8368283 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2192677 |
End bp | 2194155 |
Gene Length | 1479 bp |
Protein Length | 492 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644984277 |
Product | C4-dicarboxylate anaerobic carrier |
Protein accession | YP_003141941 |
Protein GI | 256820662 |
COG category | [S] Function unknown |
COG ID | [COG1288] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAC TCAAATTTCC TACCCCTTAC ACCGTACTGA TGCTGGTGAT AGTGTTGGCT GCGAGCCTTA CTTTTTTGTT GCCATCGGGG TCATATAGCA CTTTGCAATA TGATAAGCAA CAAGACTCTT TTGTGATACA CACTGCAAAT AATTCTTATA CTGTACCTGC TACTCAAGAA CAACTCGACG GCTTGGGTAT TCATATTCAG TTGAGCAAAT TTAAAGATGA AAAAATTAAG AAACCTATTT CGATACCTAA TACTTATGTG CAGAGTGTAC CTCACCCGCA AGGAGCTAAA TCTGTGCTTT TTGCACCTAT ACGAGGAATC TACGACAGTA TAGAGGTGAT TCTCTTCGTA CTCATATTAG GGGGCTTTAT AGGGGTGTTC AACAGTTCGG GAGCACTAAA TATGGGCGTA GGCTATTTGG CACACCGACT CAAAGGGCGC GAGGGTATCC TTATCGTTCT GCTCACTACT CTGTTGGCGC TGGGAGGCAC TTCCTTTGGA TTAGCCGAAG AGACGCTTGC TTTCTACCCT ATGTTAGTGC CTATTTTTTT AGCAGCGGGC TACGACTTAA TGGTACCCTT AGCAGTGATT TACATAGGTT CAAATGTAGG CTCTATGGCA TCGACTACCA ATCCGTTTGC GGTAATTATT GCCTCAGATG CCGCCGGAGT AGATTGGACG TCGGGGCTTA GCATACGTGT GATAGCTTTA GCGGTATGTG TACTGATAAG CATTATTTAT ATTATTCGTT ATGCCGAGAA AGTACGCAAA CACCCCGAGA AGTCAATTGT GTATGGAGTA GTCCTCCCTG AAATTTACAA TGCCAATGCC CCTGAAAAGA CTACTTCCTT AGAGCTTTCT ACTAAAATAG AGCTCTTAGT ATTTGCGCTC TCGTTTATAG TGATGATTGT AGGTGTATCG CAATGGGAAT GGTGGTTTCA AGAGATGACA GCTCTCTTCT TGGTAGCTGC TGTTGTGATT GCTATCTTAC AACGCAGTAG TGAACAACAG TTTATCAGTC AGTTTATGGC AGGAGCACGC GATTTGCTGA GCGTAGCCTT TATCATAGGG ATAGCCAGAG GGGTATCGTT TATACTGAAC GACGGACAAA TATCGGGTAC GATTTTGCAT TACGCCACCG ACCTTGTACA AGGAATGTCG CCAATGGTCT TTTTGCCAAT GCTGATGTTA GTATTTGGTG TACTGAGTTT ATTTATAGCT TCTTCCTCAG GAATGGCGGT ACTCACGATG CCTATCATAG GGTCACTGGC TTCGGTTGTG GGAGTAGAAG GGCACAGTGT GGTGAATGCT TATCTTTTTG GAATGGGTAT TATGGGGCTT ATCACCCCTA CGGGACTTAT CTTACCTTCA CTAGCAATGG TGAATATTAA CTACAAACAA TGGTTGCAGT TTTGTATGCC ATTGGTGATT ATCTTTGCAG TAGTACTTAC TATCTTATTG TGGATTTAA
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Protein sequence | MKKLKFPTPY TVLMLVIVLA ASLTFLLPSG SYSTLQYDKQ QDSFVIHTAN NSYTVPATQE QLDGLGIHIQ LSKFKDEKIK KPISIPNTYV QSVPHPQGAK SVLFAPIRGI YDSIEVILFV LILGGFIGVF NSSGALNMGV GYLAHRLKGR EGILIVLLTT LLALGGTSFG LAEETLAFYP MLVPIFLAAG YDLMVPLAVI YIGSNVGSMA STTNPFAVII ASDAAGVDWT SGLSIRVIAL AVCVLISIIY IIRYAEKVRK HPEKSIVYGV VLPEIYNANA PEKTTSLELS TKIELLVFAL SFIVMIVGVS QWEWWFQEMT ALFLVAAVVI AILQRSSEQQ FISQFMAGAR DLLSVAFIIG IARGVSFILN DGQISGTILH YATDLVQGMS PMVFLPMLML VFGVLSLFIA SSSGMAVLTM PIIGSLASVV GVEGHSVVNA YLFGMGIMGL ITPTGLILPS LAMVNINYKQ WLQFCMPLVI IFAVVLTILL WI
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