Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1760 |
Symbol | |
ID | 8368206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 2097520 |
End bp | 2100189 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644984200 |
Product | cytochrome c assembly protein |
Protein accession | YP_003141866 |
Protein GI | 256820587 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
TIGRFAM ID | [TIGR03144] cytochrome c-type biogenesis protein CcsB |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.790958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAATTC TCTTCATTGC TTTTGCTATA GCTATGGCAG TAGGAACTTT TGTAGAAAAT AGCTATGATA CCGATACCGC CCGTATTTGG GTGTATAACA CTTGGTGGTT TGAGGCGATA ATGGGGCTTT TTGTGGTAAA TTTTATAGGG AATATCCCTC GCTATCGATT GCTCAAAAAA GAGAATTGGG CAGTGCTGGT GTTGCACCTC TCGTGGGTGT TTATCATCAT AGGGGCTGGG GTTACGCGCT ACTTTGGCAA TGAAGGTATG ATTTCTCTAC GCGAAGGAGA AACTACAAAT ACTTACCTCT CCGACCGCAC TTATATCACT GCAATGGTAG ATGGCAATTA TCAAGGAGCT CTCTTGCGTA AAAAGAAACA AAAAGAGGCG CTTTTCTCGC CTTATACATC TAATCATTAC AAGTGGTCGT CCGACTTTAA AGGCAAACCT TTTAGCATTA CGTATAAATC ATTTAAACGC ATAGGCAAGG AGATGAATGC CTTAGTATTA GAGGTTGTTT CAGGTAATCA GCGCAAGGAA GTAATCGTAA TGGGCAAACG TGGCGTACAG CACCCTCCTA CCTCTATAGA TTTGAACGGC TTGCAGTTTC ACCTAAGCTA TGGAGCACGC GAAGAAAAAT TGCCTTTTAG TCTTACCCTC AACGATTTTA TAGCCGAAAA ATACCCTGGT ACCGAGAATA GTTACGCTTC CTTTAAAAGC AAAGTAACCG TGAGTGGGGG AGGGGAGAGC TTTCCTTATG ATATTGAGAT GAATCATATT CTCAATTATC AAGGTTATCG CTTGTTCCAA TCTTCTTTTC ACCCCGATGA ACAAGGTACT ATACTCTCGG TAAATCGTGA CTTTTGGGGT ACCCTTATCA CTTACGTAGG TTATATACTG CTCTTCGGCA GTTTGCTGGC ATTTATGTTT GTAGGCAAAT CCCGATTTAG AAAACTCAAT CAGCAACTTA AAGACCTACA AGCCAAAAGG TTTGCAATCG TTTTGGCATT ATGTTTTGGA TCTTTGGCTA CTGCCCAAAC CCCTATGGTA GTACCCAACA AAGCGCACGC TGAAAAGTTT GGTGCAATGC TCATTCAAGA TGATGGGCGT TTTAAGCCCG TGAATACCTT CTCTTCAGAA CTCTTACGCA AACTTAGTAA ACACGATACT TATAAAGGGC TCACTTCCGA TCAAGTCTTG CTTTCTATGT TCCTCAGTCC GCAAGCGTGG TATGAGTCAG ACATTATCTA TGTGAAGAAA GCTAATGACA GTTTGCATCG TTTTTTGGGA GTTCCCGAAG GAACCAAATG GGTAAAGCCT AAAGATTTTT TTGATGCAAA AGGACAGTAC AAGCTCGCCC CTTTATTGAA AGATATTTAC AACACAAATA CTCCTAACCA ATTTCAAAAA GATTTTAAGG AAGTAGACCA ACGTATTGGC TTGCTCAACA GAGCGTTACA AGGCGATATC TTTAAGGTCT TCCCTGTGCC TAATGACCCT AATTATAAGT GGATTTCGCA CTTAGATTAC ATAAACGACA CCCTACAAAT CACCGACCCA CTTTACAAAC AATTTGTAAA AAATGCACTG CCAGCTTACC TTATTTTGCT ACAACAAGCC ACTGAAACAG GCGATTATAG CAAAGCCGAC AAGGTGCTCA ACAATATCAA ACTACAACAA GAGTTTTACT CGGCTGAGGT ATTGCCTTCA CCTGCCAAAG TACAAACTGA ATTGTGGTAC AATCGCATCA ATATTTTTGA ACAACTCTTT CAAGCATATT TGTATCTTGG CACAGTGTTA TTTATAGTAC TATTATGGCA TATTTTTATG CCAAAACAAT TTTTTAGAAG ACTTACCCAA ATAGGTATAG CCTTGCTGTG GCTCTGTTTT ATCCTGCATA CTGTGGGACT TATTGTTCGT TGGTATCTTT CAGGTCACGC ACCTTTTAGC GATGCTTATG AGAGTATGAT ATATGTAGGA TGGTCGGCTA TTGGGGTAGG ACTTTTCTTT TCGCGACGTT CCCCCCTCAC GGTTGCTGCT ACCGCTTTTG TAACCGCTAT GATACTGATG ATCGCTCACT GGAATTGGAT GGATCCTGCT ATTGGAACCC TCCAACCCGT ACTCAATAGC TATTGGCTGA TGCTACACGT TGCCGTGATT GTAGGTAGTT ATGGACCTTT TGCCTTAGGA ATGCTCTTAG GTGTTATCAA CCTCCTACTG ATGATAGTTA CTACCCGCAA GAATGCTTAT AAAATCAATC TTATACAACA AGAACTCACT ATCGTAAACG AATTAGCTCT TACAGTGGGA CTTGTGATGC TAACTATAGG CAACTTTTTA GGAGGTATGT GGGCAAACGA AAGTTGGGGA CGTTATTGGG GGTGGGATCC AAAAGAAACT TGGGCATTGA TTAGCATTAT GGTTTATGCC TTAGTAATAC ACCTACGCTT GATACCCCAT TGGCGCGGAC GATGGGCGTT CAATTTTTTG AGTATCATTG CCTTTGGCAG TATCCTAATG ACTTATTTTG GTGTGAATTT TTACCTTACA GGTATGCACA GCTATGCTAC AGGCGATAAA ATTATCACCC CTACTTTTGT GTATTATGCT GTGGGTATAG TGCTGTTGTT AGGATTGGTA TCGTATTTGA GAGTGAAAAA TACATCATGA
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Protein sequence | MAILFIAFAI AMAVGTFVEN SYDTDTARIW VYNTWWFEAI MGLFVVNFIG NIPRYRLLKK ENWAVLVLHL SWVFIIIGAG VTRYFGNEGM ISLREGETTN TYLSDRTYIT AMVDGNYQGA LLRKKKQKEA LFSPYTSNHY KWSSDFKGKP FSITYKSFKR IGKEMNALVL EVVSGNQRKE VIVMGKRGVQ HPPTSIDLNG LQFHLSYGAR EEKLPFSLTL NDFIAEKYPG TENSYASFKS KVTVSGGGES FPYDIEMNHI LNYQGYRLFQ SSFHPDEQGT ILSVNRDFWG TLITYVGYIL LFGSLLAFMF VGKSRFRKLN QQLKDLQAKR FAIVLALCFG SLATAQTPMV VPNKAHAEKF GAMLIQDDGR FKPVNTFSSE LLRKLSKHDT YKGLTSDQVL LSMFLSPQAW YESDIIYVKK ANDSLHRFLG VPEGTKWVKP KDFFDAKGQY KLAPLLKDIY NTNTPNQFQK DFKEVDQRIG LLNRALQGDI FKVFPVPNDP NYKWISHLDY INDTLQITDP LYKQFVKNAL PAYLILLQQA TETGDYSKAD KVLNNIKLQQ EFYSAEVLPS PAKVQTELWY NRINIFEQLF QAYLYLGTVL FIVLLWHIFM PKQFFRRLTQ IGIALLWLCF ILHTVGLIVR WYLSGHAPFS DAYESMIYVG WSAIGVGLFF SRRSPLTVAA TAFVTAMILM IAHWNWMDPA IGTLQPVLNS YWLMLHVAVI VGSYGPFALG MLLGVINLLL MIVTTRKNAY KINLIQQELT IVNELALTVG LVMLTIGNFL GGMWANESWG RYWGWDPKET WALISIMVYA LVIHLRLIPH WRGRWAFNFL SIIAFGSILM TYFGVNFYLT GMHSYATGDK IITPTFVYYA VGIVLLLGLV SYLRVKNTS
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