Gene Coch_1688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1688 
Symbol 
ID8368134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp2016664 
End bp2018388 
Gene Length1725 bp 
Protein Length574 aa 
Translation table11 
GC content35% 
IMG OID644984128 
Productmembrane bound O-acyl transferase MBOAT family protein 
Protein accessionYP_003141794 
Protein GI256820515 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1696] Predicted membrane protein involved in D-alanine export 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.547038 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGTATAG ATGCCTTACT GCAATGGTTT ATTGATACAT TCACAACTGA AAACATCTCT 
AAATGGTTTG TTGATAATTT CTCATTCACA ACCGAACAAG TAAGACAATG GTTCATTTAT
GACCCTAATC ATCCACTATT ATTTAATAGT AGTTTGTTTT TAGGGTTATT TTTGGTGTTT
TATTTGGTGT ATATTATTAC CAAAAAACAC GCTCATTTCC GTACTGTTTA TGTTACCTTA
TTTTCCTTAT TCTTTTATTA TAAGGCAGGA GGTAACTTCT TTGTGTTGCT GATAATCTCC
TCATTGTTAA ATTATTTCTT TGCAGGACAA ATCTATAGAA GACAGAACGC CTCATTGCGC
AAGTTCTTCC TGGCAGTGAG TATGGTTGCC GATTTGGGTA TTTTAGCCTA TTTTAAGTAT
ACTAATTTTT TAATTGATAG TCTTAATACA CTGCTTCAAA GCAACTTTGC CTTACAAGAT
ATCATCTTGC CTATAGGTAT CTCATTCTAT ACGTTCCAAA CAATGAGCTA CACTATTGAT
GTATATCGCC GAGAGATAGA ACCTGCTAAA TCATTCTTAG ATTTTACTTT CTTCGTATGT
TTCTTTCCTC AATTAGTGGC AGGGCCTATT GTGCGTGCCA AGGATTTCAT ACCACAGATA
TACAAAAAGA TAAGCTTAAC GAAAGAAGAA ACTTCTTTTG CTTTATTCCT TATCATTGGA
GGACTAATTA AAAAAGCAGT TATTTCCGAT TATATCTCTC TAAACTTTGT AGATAGAGTT
TTCGATGCTC CCAACAGTTA TACAGCTTTT GAGAACTTAA TGGCAGTATA TGGCTATTCT
TTACAAATAT ATTGCGACTT CTCAGGCTAT TCCGATATGG CTATAGGTTT AGCGCTACTA
ATGGGCTTCA CTCTCCCTAT AAACTTCCGT ACTCCTTATC AGTCTAAAAA TATCACTGAA
TTTTGGAGAC GTTGGCACAT TTCTTTATCT ACTTGGCTAA AAGATTATCT TTACTTTTCA
GTAGGAGGAA ACCGCAAAGG TACTTTTTGG GGCTACTTCT TCCCAACCGT CTTTTTTGCT
TCCACTTTGC TATGGGCATT TCATATGCAA GAAAAAACAA TGTTGCCTCT TTACATTACC
TTAGGAGCTA TCTTTGTGTT TGTATTGGCT ATACTTATCT CTAAAAACCG ACAAAAATCA
GTGCGTAGTC ATTTCAACCA GATGACGACA ATGCTCCTAG GTGGTTTATG GCACGGAGCT
AATTTGCGTT TCATTATTTG GGGAGCATTA CACGGTTTAG CTTTGGCTGT TCATAAAACC
TTTACGGAGT TCTTTCCTAA TAAGAATCCT GAGAAGAGAA CTTTTTTTAA AGGTATCGCT
AATATCATTT TTGTAGTGAT TACTTTCCAC TTTGTAGCTT TTTGCTGGAT ATTTTTTAGA
GCCAAAGATT TCGATATCGC TTTAAGTGTA ATCTACAATA TCCAGTCTAT AACTTATGAT
CTTCATCAAT TTCAAGTTAT TGCCAAGGGC TATCAAAATG TATTTTTGTT AATGGCAATA
GGCTTTGTTT GGCACTTTTT TCCTACCAGT TTAAACGAAT GGCTTAAAAA GGTATTTGGT
GCAATGCCTA TTCTCTTTAA AGCAATTATT TTGGCACTTA CTTTTTGGGT GGTATATGCC
ACTGCTTCAA GTGGAGCACA ACCTTTTATT TACTTTCAGT TTTAG
 
Protein sequence
MSIDALLQWF IDTFTTENIS KWFVDNFSFT TEQVRQWFIY DPNHPLLFNS SLFLGLFLVF 
YLVYIITKKH AHFRTVYVTL FSLFFYYKAG GNFFVLLIIS SLLNYFFAGQ IYRRQNASLR
KFFLAVSMVA DLGILAYFKY TNFLIDSLNT LLQSNFALQD IILPIGISFY TFQTMSYTID
VYRREIEPAK SFLDFTFFVC FFPQLVAGPI VRAKDFIPQI YKKISLTKEE TSFALFLIIG
GLIKKAVISD YISLNFVDRV FDAPNSYTAF ENLMAVYGYS LQIYCDFSGY SDMAIGLALL
MGFTLPINFR TPYQSKNITE FWRRWHISLS TWLKDYLYFS VGGNRKGTFW GYFFPTVFFA
STLLWAFHMQ EKTMLPLYIT LGAIFVFVLA ILISKNRQKS VRSHFNQMTT MLLGGLWHGA
NLRFIIWGAL HGLALAVHKT FTEFFPNKNP EKRTFFKGIA NIIFVVITFH FVAFCWIFFR
AKDFDIALSV IYNIQSITYD LHQFQVIAKG YQNVFLLMAI GFVWHFFPTS LNEWLKKVFG
AMPILFKAII LALTFWVVYA TASSGAQPFI YFQF