Gene Coch_1652 details

Gene Information

• Locus tag: Coch_1652
• Symbol: pyrE
• ID: 8368098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1977485
• End bp: 1978126
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 644984092
• Product: orotate phosphoribosyltransferase
• Protein accession: YP_003141758
• Protein GI: 256820479
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0461] Orotate phosphoribosyltransferase
• TIGRFAM ID: [TIGR00336] orotate phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTTTAG ATAGTATTAC GGCACAAAAT ACCGCTGAAT TTTTATTGCA AATTAACGCA 
ATTAAATTGA ATTCTGAAAA TTATTTTACT TGGGCGAGCG GTTGGAAGTC ACCAATTTAT 
TGCGATAACC GTATAATCCT CTCATTTCCA GAGGTTCGTT CGTACTTTGC AAGCGTATTG 
GCAAGAGGCG TAAAAGAGAA ATTTCCCGAA GTACAAGTTA TTGCAGGAGT AGCTACGGGA 
GCTATTGGTA TTGGTATGTT GGTAGCTAAT GCACTCGAAT TGCCTTTCGT GTATGTGCGT 
CCTGAACCTA AAAAACACGG CAGACAAAAC CAAATTGAAG GTTTTTTGCG CCCTGAACAA 
AAGGTAGTAG TGGTAGAAGA CCTGATAAGT ACCGGAATGA GTAGCCTTAA TGCGGTAAAA 
GCCCTACGCG ATAGTGGTGC TGAGGTGTTG GGAATGGTAG CCCTTTTCTC TTACAATTTT 
GATGTAGCCA ATGAGCGTTT TACCGAGGAA AAGGTACCGC TTTACACTGC TGGCGATTAC 
GACAGTCTAT TAGAAAAAGC CTTACTTTTT GGTCGTATCA AAAAAGAAGA TTTAGAGATG 
CTCCAGCAAT GGCGCAAAAG TCCGGATACT TGGAAACAGT AA 

 

Protein sequence

MILDSITAQN TAEFLLQINA IKLNSENYFT WASGWKSPIY CDNRIILSFP EVRSYFASVL 
ARGVKEKFPE VQVIAGVATG AIGIGMLVAN ALELPFVYVR PEPKKHGRQN QIEGFLRPEQ 
KVVVVEDLIS TGMSSLNAVK ALRDSGAEVL GMVALFSYNF DVANERFTEE KVPLYTAGDY 
DSLLEKALLF GRIKKEDLEM LQQWRKSPDT WKQ