| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1630 |
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| Symbol | |
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| ID | 8368076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1944616 |
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| End bp | 1946442 |
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| Gene Length | 1827 bp |
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| Protein Length | 608 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644984070 |
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| Product | ABC transporter related |
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| Protein accession | YP_003141736 |
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| Protein GI | 256820457 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACTCA AGAGATTTAT CCCTTATATA TTGCCTTATA AGAAACAGGC AATACTGAAC
ATATTTTTCA ATATTCTTTA TTCACTCTTT AGTGCACTTT CGTTTGTGGC ACTTATCCCG
ATGCTTGATG TACTTTTTGG CAAAGCGCAA ACAGTAGCTG AAGCTCCTGT ATATTCGGGT
AATTTGTTGG ATTTAGGGAG TTATGGTAAA GCCTACTTAA ACTACAAAGT AGGAATTCTT
GCGGGAGAAA ATACTATTTG GGCTCTTGGA ATAGTGATTG CTTTGGTAAT TTCACTCTTC
TTGCTGAAGA ATATGTTTAG CTATTTAGCT TCTTTTTTCA TCACTTACCT TCGCAATGGT
GTATTACGCG ATTTGCGTGA TGCACTTTAC AAAAAGGTTG TAAGCCAACC GATAGCATTT
TTCTCAGAAC AGCGCAAAGG CGATATTATG TCGCGTATGG TAGGTGATGT AAACGAAGTA
CAATACTCAT TGCTCTCGGG ATTGGAGGCT TTTGTGAGAG AACCTCTTAC TATTCTCTTT
TCTATTTTGG TGATGCTAGG TATTAGCGTG AAACTTACAG TATTTACCTT TGTATTTATT
CCTATTGCAG CGGCAGTAAT TTCGAGGATA GGTAAATCAC TAAAAAAGAA TTCAATAGCT
TTACAACAAG AGCAAGGGCG ATTTCTTTCG CTCATAGAAG AGACTATAGG GGGATTGCGC
ATTATAAAGG CATTTAATGC TGAGGGTATT TTTTCTAAGA AATTTAAGGA ATCTAGTAAT
ACTTTTAACC GATTGAGCAA TAAGGTAATG AACCGTCAGA ACTTAGGGTC GCCAATGAGT
GAGTTTCTCG GTATCCTGAT GATTGCTATT TTGCTGTGGT TTGGAGGCTC GTTAGTGTTG
GTAGATAAAA CATTAGAGGG CACTCAATTC ATTGCCTTTA TGGGATTGGC GTACAATATT
CTCACCCCCG CTAAGGCTAT CAGTAAGGCA TCATACGATA TGCGAAAAGG GAATGCAGCA
GCCGAACGTA TTTTGGAAAT CCTTGATTAC GAGAATCCTA TTAAAGAGTG TGAAAATCCT
GTTGTAATTT CTGATTTTAC CACTGCTGTA GCTCTGAAAG ATATTACTTT TGCGTATGCT
GAACTGCCCG TACTCACTCA TTTTTCTTTG GAAATACCTA AAGGAAAGAC AATTGCCTTA
GTAGGGCAAT CAGGGAGTGG CAAGAGCACT ATTGCGAACC TTATCACTCG TTTTTACGAT
GTAAATCAGG GAGAGGTACT TATCGATGGG GTGAACGTAA AAGATATGCA AACTGCCTCC
TTGCGAAAGC TCATAGGGGT GGTATCGCAG GATTCTATTC TTTTTAATGA TACGGTAAAG
AACAATCTGC TGATAGGAAA GCCCGATGCT ACTGATGAAG AACTAGTGAC AGCGGCTAAA
ATAGCTAATG CTTATGAATT TATAAAAGAC CTTCCCAAGG GGTTCGATAC CAACATAGGC
GATGCAGGTA GTAAACTGAG TGGCGGACAA AAACAACGTC TTAGTATTGC TCGTGCAGTG
CTGAAAAACC CACCTATAAT GGTACTCGAT GAGGCAACTT CGGCACTTGA TACAGAAAGC
GAGCGTTTGG TACAGAATGC CTTAGAAAAT ATGATGAAGA ACCGCACTTC GGTAGTGATT
GCACACCGGC TTTCAACAAT CCAAAATGCT GACCAAATAG TAGTAATGCA AAAAGGGCAA
ATAGTAGAGC AGGGTACCCA TACTGAGCTG ATACAAAGGA ATGGTATGTA TAAAAAGTTA
GTGGAAATGC AATCGTTTGA GCAATAA
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| Protein sequence | MKLKRFIPYI LPYKKQAILN IFFNILYSLF SALSFVALIP MLDVLFGKAQ TVAEAPVYSG
NLLDLGSYGK AYLNYKVGIL AGENTIWALG IVIALVISLF LLKNMFSYLA SFFITYLRNG
VLRDLRDALY KKVVSQPIAF FSEQRKGDIM SRMVGDVNEV QYSLLSGLEA FVREPLTILF
SILVMLGISV KLTVFTFVFI PIAAAVISRI GKSLKKNSIA LQQEQGRFLS LIEETIGGLR
IIKAFNAEGI FSKKFKESSN TFNRLSNKVM NRQNLGSPMS EFLGILMIAI LLWFGGSLVL
VDKTLEGTQF IAFMGLAYNI LTPAKAISKA SYDMRKGNAA AERILEILDY ENPIKECENP
VVISDFTTAV ALKDITFAYA ELPVLTHFSL EIPKGKTIAL VGQSGSGKST IANLITRFYD
VNQGEVLIDG VNVKDMQTAS LRKLIGVVSQ DSILFNDTVK NNLLIGKPDA TDEELVTAAK
IANAYEFIKD LPKGFDTNIG DAGSKLSGGQ KQRLSIARAV LKNPPIMVLD EATSALDTES
ERLVQNALEN MMKNRTSVVI AHRLSTIQNA DQIVVMQKGQ IVEQGTHTEL IQRNGMYKKL
VEMQSFEQ
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