Gene Coch_1624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1624 
Symbol 
ID8368070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1938726 
End bp1939706 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content43% 
IMG OID644984064 
Product6-phosphofructokinase 
Protein accessionYP_003141730 
Protein GI256820451 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0205] 6-phosphofructokinase 
TIGRFAM ID[TIGR02482] 6-phosphofructokinase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.664156 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAGTAA AAAAAATAGC AGTATTAACA TCAGGAGGAG ACGCTCCTGG TATGAACGCC 
GCCATTCGTT CAGTGGTACG TACTTGTGCA TACCACAACA TCGAAGTGGT AGGTGTATAT
CGTGGCTATC AGGGAATGAT AGAAGGCGAT TTTGAAGAAA TGAACGCACG TAGCGTTCGA
GATATTATCA ATAGAGGAGG TACTATCTTG AAATCAGCCC GCTCTAAAGA TTTTAAAACT
CCTGAAGGGC GCAAGGCAGC TTATGAAAAA TTAAAAGCTG CAGGGGTAGA TTCTTTGGTA
GTAATAGGAG GTGATGGCTC TTTCACTGGG GCACTCTTGT TCAACAAAGA ATTTGGTTTC
CCCGTAATGG GAATCCCTGG TACTATCGAT AACGATATCT ATGGTACTGA TTTTACTTTG
GGATATGATA CCGCTCTCAA CACTGTAATT GAGGCTATCG ACAAGATTAG AGATACTGCA
AGCTCTCACA ACCGCTTGTT TTTCATAGAA GTAATGGGGC GTGACGCAGG ACACATCGCC
TTGAACTCTG GAGTAGGGGC AGGTGCTGAA GAAATCTTGA TTCCAGAAGA GAATATAGGA
CTTAAAAAGC TACTTGAATC TTTGGAAAAA AGTCGTAGGA CTGGTAAAAC TTCCAGCTTG
GTAGTGGTTG CTGAAGGCGA TAAAATAGGT AAAAACGTAT TCGAACTTAA AGAATATGTA
GAGCAACACC ACCCCGATTA CGATGTGCGT GTATCAGTAT TAGGGCATAT GCAACGTGGA
GGTGCTCCTT CTTGCTTCGA CCGCGTATTG GCAAGCCGTA TGGGGGTAAA AGCAGTAGAA
TCACTCCTTG AAGGGAAATC TAACTATATG GTAGGAATCC GCAATAATAA AATGGAACTC
ACTCCGCTTG AAAAAGCTAT CAAAGGTAGT TCTAAAATAG ATACGGAACT CCTCCGTGTA
GCCGAAATAA TGGCAACTTA G
 
Protein sequence
MSVKKIAVLT SGGDAPGMNA AIRSVVRTCA YHNIEVVGVY RGYQGMIEGD FEEMNARSVR 
DIINRGGTIL KSARSKDFKT PEGRKAAYEK LKAAGVDSLV VIGGDGSFTG ALLFNKEFGF
PVMGIPGTID NDIYGTDFTL GYDTALNTVI EAIDKIRDTA SSHNRLFFIE VMGRDAGHIA
LNSGVGAGAE EILIPEENIG LKKLLESLEK SRRTGKTSSL VVVAEGDKIG KNVFELKEYV
EQHHPDYDVR VSVLGHMQRG GAPSCFDRVL ASRMGVKAVE SLLEGKSNYM VGIRNNKMEL
TPLEKAIKGS SKIDTELLRV AEIMAT