Gene Coch_1618 details

Gene Information

• Locus tag: Coch_1618
• ID: 8368064
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Capnocytophaga ochracea DSM 7271
• Kingdom: Bacteria
• Replicon accession: NC_013162
• Strand: +
• Start bp: 1926431
• End bp: 1933234
• Gene Length: 6804 bp
• Protein Length: 2267 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 644984058
• Product: hypothetical protein
• Protein accession: YP_003141724
• Protein GI: 256820445

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACAAAC ATTTAACTAT TAGGTTATCG CTATTTATTT TACTATTTCT ATTTGTAAAA 
GGGCAAGCAC AGTCGTGTGA TGAAAACGTA TTAAAAGGGT TAGAAAGAAC CCGTATTTAT 
TACCATAAAG AAGTAACCAA AGACAGTAAT GCTTCATTCT TCATTAAAAA CCCTTTGAAA 
GGTACTACCT ATTCATTTAT AGATAAGGCA ACTGGTGTTG CTTATAGCAA ACTTTATACA 
GGTATGCCTG AGGAACTCAC CATTGAGATT CCAGTAGGGA AGGTAGCTAC TGAGCAGAGC 
TTTATATTTA GGGCTACCAA CGGCGATTGT GCTTATCAAT CGTTGGACAA TCGCGATGTT 
AATAAGCGAT ATTATGTAAT TACCCCCAAT ACTCAACTCA AACTTTCTCT CAGTGTCGAA 
CATGAATGGT GTGCACACTC AGGAGCAGTG CATATGAATA TGGTGGGTGA TGATAATGCC 
AATTACAATT TCTTCTTCAA AAAGCCTAAT GGCAATTTTG AGCAATTGGC AGGACATTCT 
TATACTAGTT TAGATGCGGG TACCTACGAA GTAAAAGCGG TAAACAAGAA CGACAATAGT 
AAAACCTATA CACAAAAAGT AAAAATAGAG AAGCTTACTA AACACGTCGA TTTTCAATTG 
AGTAGTGTAG TCGATGTGTG TACTGGCAAA ATAGCTATTT ATGTAGATAC TAAAAAAGGA 
AAGACAGGAG GTTCAGTTGA TAACAGTTAT CCCCTATTTT TTACTTTGCT CAAAAATAAT 
GTAGAGATAA AAAATCAAAC TTCTCCGATA TTTAAAGATG TAGAAGAAGG TGCTACTTAT 
GAAGTGCGTG TATACGATGT TTGTGGTACT AGTGGTGGTA ACTTTTCTAC TCAAACTTAT 
AAAGTTGAAA AAAGATTAGG CGTTTTCAAG GTTATTAATC ATACCGGCTT TTCTCCTAAA 
GCGAATTGCC CTTATATGGT TTCATTTACC TCAGAACTCT ATGTGAAAGA TGCGAGAGAA 
ATGGTTGAAA AAAACCTAAT TCCTTATCCG CTCGCTTTTA CTTTTGAGAT GACTTCACCT 
TCTAATAAGG TGTATCATTT CTCTTTTGTA GTGAATAACA AGCAAGAATT AGAAGAAAAT 
TTTACTCCAA CAGAAAATAG TTTTTATCTA AGACCTCTCA AACTTTCAAA TAATAATATT 
TCTTATGAGG TAGGTAAATG GAAACTTAAA GGTACTTATA CTATTTGTGG TAAACAGAAT 
ATTATTCCTG AAGCTGAAAA AGAGGTTTTT TTACCTATTA CAGGGGTAGG TATAGGTATT 
GTTCAAGATG ATTTTGCTAC TAATTGTAGA AACCAAAAGC TCGTTCTTAC TAATAGTAAG 
AGTAATCAGG TACAAAATTT AAAGAACTTC TATACAGTAT TAGAAAATGC TCCTGCTGGA 
TTTGATTATC AAGCAGCAGG TTTTTATAAA ATAACAACTA CTAATCCACT TTTGCAAAAC 
AAATGGGTGA AATTCTTTGA AAATACTGAT GGTAAAAAAA CATTATTGCC TGCAAAGTTT 
ATAGAAGAAG GAGGTGATTA CAAATTTAAA GTGGTAGATG AATGTACGAA TACTACTAAA 
GACCTTAGCT ATACCGGCTA TGCTACTTCT CAAGGGCGTT TTGAATTAAA AGCTAAAGTC 
TATGGCACTT GTAGTGATCC TTCAGGAGCT CCTGACAATA ATTCTCTTTG GAAAGAAGTA 
GTGCTTGAAA GAGGAAATAC TACTGATGGA ACCATTACTA AAGTTGAAAT CATTTCTTAT 
GAGAAAGATA GCCGTTTTGC CGACTATAGT GCCTTAATGC CTATTACATT GCCTATTGAT 
ATTACCGAAA CCTATAGATC AGGAGAACAA CAGTGGAGAA TAAAACTCCC TGCAGGAATT 
TACAATGTGC GATGGTCAGG CTCGTGTAAT AAAACAGAAA CTCTGAAAGT GCAAACTGGA 
GGTCCTGAAA ATACTATCTT TGAGTGGCAG GATGGTTGTA ATCCTAAATT GATAGTGAAA 
AGAAATACTT CTTATTCACT TGCTGAAGGT ATAGAGTATA CTTTAGAACG CTATGATACT 
AAAGAAAATA GATGGGCATC TGTTACTTAT GGTTATTATG GAGGAGATAC TTTTCTTGAT 
GGGAAAAGAG ATAGATTTGA GTTCAATATT CCGAGTCCTC AACAAGGAAA ATATCGTGTC 
TTGCGCTCTA TACAACCCAA TAGTACAAAC AGATTAAAAG AGTGTACCCG TGTGGTAGCT 
GAACATGAAT TTACCGAGGG TGAAATGCAA CAGCCTAGAG GAGTGCGTAT GGATTGCTCA 
GCAATAGGAG GAACTCAAAA ATATCATATA GTCATTATTC CACAAGGGGG AGTGCCTCCT 
TACACTTATG AATTATCTGA AGCTGAGATA GATGGTAGCA CTACAAATTC TGTGTATCAG 
AATAATGCTG ATAACAATTT CTTTATCAAT GTAGATGCTT CTAAACCTCA AGCTCGTTAT 
AAGTTTCTGG TGAAAGATTC TTGTGGTAAA GGGAAAGTTT ATGAAGAAAC ACTTTCACAA 
ATAGCTCCTT TTGCTGTACA AAAAAATCAA GAGTTTTATT GTGTTGGTTC TAAAGGTGTG 
CTATCAGTGC CACAAATAAG TGGAGTTAGT TATCAGTGGT ATCGCAATGA TCAACCTACG 
ACTGTATTGA GTACAAGTAA TCAGCTTATT ATAAACAATC TCACTCAAGC CGATCTCGAC 
AATACTTTTA GCTTGAAGCT AACGCTCACT AATATTACTG ACCCTACAGT AAAAAGCTGT 
ATTGAGCAAA ATCTTAATGG TTTTGATACT ATCCGTTTCA ATACTCACAC TCCTTATAGC 
CAAACTTATA AAGCTCCTAT AGCTGTTAAT AGAGTGGAGT GTTTAGAAGA GAAAAACAAT 
AGTGTTAATA ATATTTATGA TGTAAATAAA CTCTTTAAAG ACGTCCCTAC TTCTTTTGAG 
GCTGGTGTTT CTTATGATAT AATTGATAAA GATGGATTGA TTTCTACTAC TAGGATGGAT 
TATTTAGGAC TAAAAGATAT GATAAAAATG AGTCCGGCAC TTGTAGGAAA ACATACTTTT 
ATATACCGCA TAAAATCGGC TTGTGGTTCC GTGATTACAC AAACAGAAGC TACTTTAGAA 
GTAAAAACTT ATAAACAAAT CTATGCTACA AGTATAAATG TTTGTGAAGC AACTAAAACA 
TTGGCAGAAC TTGAAACGAT TATTAAAAAC ACAAACACAG GTATAACAGC ATCTATGTTT 
GGTAATAACT TTGAGTTTCA GTGGTATCCT ACTTCTGTAG ATGCAATTAA TGAAACGAAT 
AGAATTACCA CTCCATCGCT GTCCCTATCC GAAGGGAATA ATCAGTATTA CATAAAAGGG 
AAACATATAG GTGATAGTTT CTGTTTTTCT TCACCTGCAC AAGTGAATAT TATGCGTCTT 
TCCTCATCTT CTAAAGGTGA TAAAACCATA ACACTTTGTG AAGGAACTAC CATAACCGAC 
TTGAAGAAAG AAATTGCTAA GCCATCTACT TCCGATGTAA ATAAAGTAGC TGTTTATAAG 
GGTACAACCC TACTTTCTAA CGATGATCTG TTGCAAACAG GTATTCAGTA TACTTATACC 
TATAAAGTGG GTACTTGTGA AACGCCTTCG GCTAATATAA ACCTTACTCT CACCCCTATA 
ACTTCTATAC TCCCAGTAGA AAGTTTAGTA GTATGTGATT ATGAGGTGGA AAACCTATCT 
TATTACACTA CTTATGCTGT GGTAATGAAT TACCTTCAAA CAAAGTATGC AGGTAAGACA 
GTTAAATTGT ATCAAAGTTT TGGACCTTAT AATATTCCTC AGGTACAACC TACTGATAAA 
ATATTTTTAA ATACTGATAG ATTTTCGTAT ACTTTGCAAG AAGCAGGAAA ATGTGAGTCA 
GTTAGACAGA AAATTATAGT TGTAGCCGAT ATTAATCGTG CTATAGCTAC TACAGTAGCT 
ATAAGCGTAT GTGAAGAAGA TAAAGTGTCT GCTATAAGAG CCAAGTTAAT AGGAGATAAT 
ATCAAAATCT ATAAAAAATT AAGAACATCT TCTCAGAATG CTGTTCTATC TACTGAAGTT 
AATGATAATG AAGATATAGA TTGGACAGAA GGAATAGAAT ATTTCTATAC TATAAAAAAC 
ACAGGAGATA CTTGTGAAAG TAGAAAAGAA AGGATATACC TTTCGAAATC ATTAGGAGGT 
AAAACTTTAG CACAGCCAGT CTCTTTATCA TTGTGCAATA GCAATGCTAC TATAGGGGAT 
TTGAAAGTAG CCTTGCAGGG AAATGAAGTG AAAATCTATA CACTTAATGC TCAAAATAAA 
TATGTAGAGG AAGCAGAAGC CACAGTTCTT AATGCTGCTA CCACTTATTA CTACACCCTT 
CGCGATATTG GAAAATGTGT GAGTGAAAAG GCTCCTATAA CCTTTACACT TTTGCAGCGT 
CCTGTCACTC CTACAGTTAC CCAAACTACC CAATCTTTCT GTAGTAATGC CACCATAGCT 
TCCTTGCAAC CCCAAGGCGC TAATATAATA TGGTATGCTA CAGCTACCAG CACAACACCT 
TTGGCAAATA CAACGCCTTT GGTAGCGGGT AATACTTACT ATGTAGCTCA GAGAAATGGC 
AGTTGTGAAA GTGCCCGTGC AGTAGTGAAT GTAATCTATA GCAATACATT AAGCCTTACT 
GTACCAGCAC CTTTAACCAT TGCTTGCGAT GATGCTAACA TAGCAACAAC TGTAGGCAAT 
TGGCTCAACC AAGCTACAGT TACCGATACT TGTGGTACGG CTACCCTTAC CCACAACTAC 
ACTGCGGTGA AACCGACGGA TTGGTGTAAC ACTTCGATAG TAACTATTAC CTTTGTAGGT 
AAAGACCCAT TAGGCAACAC CGTTACCAAA ACAAGCACTA TCAAAGTATT GCAAATTGAT 
GCTGTAGACG ATACACATAC GGGTATCATC AATGGAGCCA ATGGTGCTAA TGATGTGATT 
GATGTATTGC AAAATGATAG GGTAGGAGAG ACACAAGCTA CTACAAGCAA TGTACAGCTT 
ACGGTAGTAA CCCCTGCTAC TGGAGGAACC AATGTACCTA CACTTAATAC CGCTACAGGT 
AAAATATCAG TCCCTGCAGG CACTAAATCG GGTACTTATA CTATTCAGTA CAAAATCTGT 
CATACCGAAA ATAGTATAAC CGTTTGCGAC ACAGCCACCA TCACTGTAAA AGTAGGCAGT 
ACGCCAATTG TTGCCAAAGC CGATACTTAT ACGATAACCA ATGGTACTAG CACAACAACT 
ACCACAGGTA CGGTATTAGA TAACGATAAA CTCGGCACTA AAACGCCAAC AACTACCGAT 
GTGATTCTTA CCGTAGTAAC TACCACCACC GATGTAGTAG GAGCGACTAA AACGCCTACG 
CTCAACAACA ATGGTACTGT TACGGTACCT TCGGGTACTA GATCGGGTAC TTACCAAATA 
GTGTATAGCA TCTGTGAGCG TTTGAATCCT GATAACTGTG CAACAGCCAC AGCTACTGTA 
AAAGTAGGCA GTACGCCAAT TGTTGCCAAA GCTGATACTT ATACAATAAC CAATGGTACT 
AGTACAACAA CTACCACCGG TACGGTATTA GATAACGATA AACTCGGCAC TAAAACGCCA 
ACCACCACCG ATGTGATTCT TACCGTAGTA ACTACCACCA CCGATGTAGT AGGAGCGACT 
AAAACGCCTA CGCTCAAGAA CAATGGTACT GTTACGGTAC CTTCGGGCAC TAAATCGGGT 
ACTTATGAGA TAGTATACAG CATCTGTGAG CGTTTGAACC CTGATAACTG TGCAACAGCC 
ACAGCTACTG TAAAAGTGTT TGTTCCTACT GTAGTAACGC CAACGACTAT TGAAGCAGTG 
AACGATGGGG TAACTACGAT TACAAGCATT GTAGGCGGCA CTACGCCAAG CGTTCTTACT 
AATGATAAAC TCAATGGTGT ACCAAATCCA AGTATCAGTT CTGTAACACT TACTTGGAAT 
ACAGCAACTC CTACGGGCTT CACCTTGAAC CCTAATGGAA CGATTACGGT AGCACCAAAC 
ACCCCTGTGG GTATCCATAC GATAAGCTAC ACTATATGCG CCGTAGCAAG TCCTACGGTA 
TGTAGCACCG CAAGTATTGT GGTAACAGTG AGTGGTACAA CCACAAGCAC CACCCCAGTA 
TTGCCAATAG CAGTAGATGA TCGTTCTACA ACCACTATCA ATACTCCAGT AGTGGTGAAT 
GTATTGGGTA ACGATACCCC TAACGGAGCA ACAACTCCTA ATGTGGTAGC CACCCCTGCT 
AACGGTACAG TAGTTGTGAA TGTAGATGGT TCTATAGAAT ATCGTCCAAA TACTAATTTT 
GAGGGCACTG ATACCTTTGT GTATAAACTT TGCAACACCG ATGGTTGTGC TTCAGCTACT 
GTTACTGTCG ATGTAGTGAA CAAGATAGTG CCTTACAATG GTATGTCGGT AAATGGCGAT 
GGCAAAAACG ATTATTTTCA TATCGGTGGC ATTGAGCGTT ACCCTAACAA TGTGGTACGT 
ATCTATAACC GTTGGGGGGT GAAAGTATTC GAGTCCGAAG GTTATGACAA TGTTACCCGC 
GTATTTAGAG GTATCTCTAA CGGACGTGTA ACTATCGAAC AAGCCGATAA GCTCCCACAA 
GGAACGTATT ACTACGTGAT AGAGTATTAT GATAGTAATA ACAACAAAGA ATCTTTAGTT 
GGTTGGTTAT ACATTAAGAA ATAG 

 

Protein sequence

MYKHLTIRLS LFILLFLFVK GQAQSCDENV LKGLERTRIY YHKEVTKDSN ASFFIKNPLK 
GTTYSFIDKA TGVAYSKLYT GMPEELTIEI PVGKVATEQS FIFRATNGDC AYQSLDNRDV 
NKRYYVITPN TQLKLSLSVE HEWCAHSGAV HMNMVGDDNA NYNFFFKKPN GNFEQLAGHS 
YTSLDAGTYE VKAVNKNDNS KTYTQKVKIE KLTKHVDFQL SSVVDVCTGK IAIYVDTKKG 
KTGGSVDNSY PLFFTLLKNN VEIKNQTSPI FKDVEEGATY EVRVYDVCGT SGGNFSTQTY 
KVEKRLGVFK VINHTGFSPK ANCPYMVSFT SELYVKDARE MVEKNLIPYP LAFTFEMTSP 
SNKVYHFSFV VNNKQELEEN FTPTENSFYL RPLKLSNNNI SYEVGKWKLK GTYTICGKQN 
IIPEAEKEVF LPITGVGIGI VQDDFATNCR NQKLVLTNSK SNQVQNLKNF YTVLENAPAG 
FDYQAAGFYK ITTTNPLLQN KWVKFFENTD GKKTLLPAKF IEEGGDYKFK VVDECTNTTK 
DLSYTGYATS QGRFELKAKV YGTCSDPSGA PDNNSLWKEV VLERGNTTDG TITKVEIISY 
EKDSRFADYS ALMPITLPID ITETYRSGEQ QWRIKLPAGI YNVRWSGSCN KTETLKVQTG 
GPENTIFEWQ DGCNPKLIVK RNTSYSLAEG IEYTLERYDT KENRWASVTY GYYGGDTFLD 
GKRDRFEFNI PSPQQGKYRV LRSIQPNSTN RLKECTRVVA EHEFTEGEMQ QPRGVRMDCS 
AIGGTQKYHI VIIPQGGVPP YTYELSEAEI DGSTTNSVYQ NNADNNFFIN VDASKPQARY 
KFLVKDSCGK GKVYEETLSQ IAPFAVQKNQ EFYCVGSKGV LSVPQISGVS YQWYRNDQPT 
TVLSTSNQLI INNLTQADLD NTFSLKLTLT NITDPTVKSC IEQNLNGFDT IRFNTHTPYS 
QTYKAPIAVN RVECLEEKNN SVNNIYDVNK LFKDVPTSFE AGVSYDIIDK DGLISTTRMD 
YLGLKDMIKM SPALVGKHTF IYRIKSACGS VITQTEATLE VKTYKQIYAT SINVCEATKT 
LAELETIIKN TNTGITASMF GNNFEFQWYP TSVDAINETN RITTPSLSLS EGNNQYYIKG 
KHIGDSFCFS SPAQVNIMRL SSSSKGDKTI TLCEGTTITD LKKEIAKPST SDVNKVAVYK 
GTTLLSNDDL LQTGIQYTYT YKVGTCETPS ANINLTLTPI TSILPVESLV VCDYEVENLS 
YYTTYAVVMN YLQTKYAGKT VKLYQSFGPY NIPQVQPTDK IFLNTDRFSY TLQEAGKCES 
VRQKIIVVAD INRAIATTVA ISVCEEDKVS AIRAKLIGDN IKIYKKLRTS SQNAVLSTEV 
NDNEDIDWTE GIEYFYTIKN TGDTCESRKE RIYLSKSLGG KTLAQPVSLS LCNSNATIGD 
LKVALQGNEV KIYTLNAQNK YVEEAEATVL NAATTYYYTL RDIGKCVSEK APITFTLLQR 
PVTPTVTQTT QSFCSNATIA SLQPQGANII WYATATSTTP LANTTPLVAG NTYYVAQRNG 
SCESARAVVN VIYSNTLSLT VPAPLTIACD DANIATTVGN WLNQATVTDT CGTATLTHNY 
TAVKPTDWCN TSIVTITFVG KDPLGNTVTK TSTIKVLQID AVDDTHTGII NGANGANDVI 
DVLQNDRVGE TQATTSNVQL TVVTPATGGT NVPTLNTATG KISVPAGTKS GTYTIQYKIC 
HTENSITVCD TATITVKVGS TPIVAKADTY TITNGTSTTT TTGTVLDNDK LGTKTPTTTD 
VILTVVTTTT DVVGATKTPT LNNNGTVTVP SGTRSGTYQI VYSICERLNP DNCATATATV 
KVGSTPIVAK ADTYTITNGT STTTTTGTVL DNDKLGTKTP TTTDVILTVV TTTTDVVGAT 
KTPTLKNNGT VTVPSGTKSG TYEIVYSICE RLNPDNCATA TATVKVFVPT VVTPTTIEAV 
NDGVTTITSI VGGTTPSVLT NDKLNGVPNP SISSVTLTWN TATPTGFTLN PNGTITVAPN 
TPVGIHTISY TICAVASPTV CSTASIVVTV SGTTTSTTPV LPIAVDDRST TTINTPVVVN 
VLGNDTPNGA TTPNVVATPA NGTVVVNVDG SIEYRPNTNF EGTDTFVYKL CNTDGCASAT 
VTVDVVNKIV PYNGMSVNGD GKNDYFHIGG IERYPNNVVR IYNRWGVKVF ESEGYDNVTR 
VFRGISNGRV TIEQADKLPQ GTYYYVIEYY DSNNNKESLV GWLYIKK