| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1590 |
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| Symbol | |
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| ID | 8368035 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1897005 |
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| End bp | 1899377 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644984029 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003141696 |
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| Protein GI | 256820417 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAA AATGTTTGCT ACTATTGTTT TTAGTAGCTA CAACTGCTGT TTTTGCACAG
CACAAATACA CCCTTAGTGG TTCGATTGCT GATGCTTCTA ACGGCGAAAA GCTCTTAGGG
GTAAACTTTA TCATCAAAGA ACTGCACACA GGTACCTCTA CCAACGAGTA CGGGTTCTAT
TCTATTACCT TGCCCGAAGG CAAATATACC ATTACCATTG AGTATATAGG CTATGGTACT
CACCAAGAAA CTATAGTATT AAACAAGAAT ATCCGCAAAG ATTACAAACT GAAGCCTGAG
GCTATTCAGC TTACAGGAGT AGACGTAAGT GCAAATGCCA CAACCCAAAA AACAGCAGTA
CGCAAGCCTG AAATGAGTGT AGCTTCTATT CCTATCGCTA CGGTGAAGAA ACTGCCTGTA
CTAGTAGGTG AAGTAGATAT TATCAAAACG CTGATGCAGA TGCCAGGGGT GAGCAACGCA
GGCGAAGCAT CATCAGGATT TAACGTGCGT GGCGGTGCTG CCGACCAAAA TTTAGTGCTT
CTTGATGAAG CAACGATTTT CAACGCTTCG CACCTCTTTG GTTTTTTGAG TGTCTTCAAC
GCTGATGCTA TACGTGATAT GAAGCTCTAC AAAGGAGGAA TTCCAGCACG TTATGGCGGA
CGTATCGCTT CCGTTTTGGA TATTTATCAG AAAGAGGGTA ACAAGAACAA GTTTGGCGCT
ACAGGGGGCA TAGGGGTGCT CTCTTCACGA TTACTTGCGG AAGGTCCTAT AGTGAAAGAC
AAAGCGTCGT TTTTAGTAGG AGGTCGCGCC TCTTACGCTC ATCTCTTTCT CAAACTGAGC
GACAATGAAA ATTCGATGTA CTTTTACGAC CTCAATACAA AACTCTCTTA CCAACTGAAC
CAAAACAATG CGCTGTATCT TTCGGGTTAC TTTGGTAGAG ACCTTTTTAA ACTGAGCAAT
AACCTTACTA ATGCTTATGG TAATGCTTTA GTGAATTTGC GTTGGAATCA CTTATTTACT
GAGAAGCTCT TCTCTAATTT ATCTGCTATT TATAGCAATT ACAACTATAA GTTTGACTTT
AACTGGATTG ATATGATATG GACTTCAGGG ATAGAGAATT TCAACCTAAA ATATGATTTC
AAGAACTATG TATCAGAGAA GTTTAAATTC ACTTATGGAT TTCAAGGACT ATATTATACC
TTCAAACCTG GTAAAGTCCT CCCTAAATCT CCTGCCTCTA CTATCAAAGA AAAGGTTCTT
GACCATAAAT ACGCTGCCGA AACAGCTTTT TATATAGATG CCGAACAGAA ATTAGGAGAT
GCTCTTACGG TATCGTACGG AGTGAGATTG AGCTCTTTCT ATCACTTAGG AAAGCGTACT
GTAAATGTGT ATAAAGATGA CAACCCTGTG ATATTTAACG CTAGCCGACA AATCTATCAG
AAAGCAACCC CTATTGGGAC GAAGTACTAC GGTAGTAACC GTATTATAAA TTTGTACTCT
AACTTCGAAC CGCGCTTTAC TATGAGTTAT GCTTTCAACG ATAATAAATC AATAAAAGCG
AGTTATGCGC GTACGGCTCA ATATGTACAT TTGATTTCTA ACACAGCTTC GCCTTCGCCT
TTGAACGTAT GGGCACCCAG TGATGAGTTT ATCAAACCAC AGTTAGCTGA CCAAGTGGCG
TTGGGTTATG CTTCTAACTT CTCGGACGAT AAATACAGCA TAGAGGTTGA AACTTATTAC
AAGAAAGTGC AAAATCGGTT AGACTATATA GACGGTGCGA ACCTCATTGC TAACGAAGCA
ATTGAACAAG TATTGCTAAC AGGGGAAAAC AGAGCTTATG GTTTGGAACT GTTATTGCGT
AAAAACACCG GTAAACTCAC TGGGTGGATA GCTTATACAC TCTCAAAATC GGAAATGCAA
ACTAAAGGAC GTACCTCTGA AGAAATAGGT ATCAACTACG GCGACTGGTA TAGTGCTCCC
TACGACAAAC CTCACGATGT TTCGATTACG GCTACCTATG AGCTCTCTGC TAAATGGACA
TTCGGAGCTG TATTTAACTT TCAATCAGGC TTACCTACTA ATTACCCCGT AGGACGTTAT
AACTACTTAG GAATGAGTGT TCCTGACTAT AGCAAACGAA ACGAATACCG CTTGCCTACT
TATCACCGTT TGGATCTTTC GGCTACCTAT ACGCCACAAC GCCCAAACAA GCGTTGGAAA
AGCGAATGGG TATTCGGTAT TTACAACGTG TACAACCGCA AGAATGCTGT GAGTGTTTCC
TTCCGTGAGA ACTTAGACAC CCATAAAAAT GAAGCCGTTA AACTCTCTAT TTTTGGTATC
ATACCCAGTG TAACTTATAA TTTTAGTTTC TAA
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| Protein sequence | MKRKCLLLLF LVATTAVFAQ HKYTLSGSIA DASNGEKLLG VNFIIKELHT GTSTNEYGFY
SITLPEGKYT ITIEYIGYGT HQETIVLNKN IRKDYKLKPE AIQLTGVDVS ANATTQKTAV
RKPEMSVASI PIATVKKLPV LVGEVDIIKT LMQMPGVSNA GEASSGFNVR GGAADQNLVL
LDEATIFNAS HLFGFLSVFN ADAIRDMKLY KGGIPARYGG RIASVLDIYQ KEGNKNKFGA
TGGIGVLSSR LLAEGPIVKD KASFLVGGRA SYAHLFLKLS DNENSMYFYD LNTKLSYQLN
QNNALYLSGY FGRDLFKLSN NLTNAYGNAL VNLRWNHLFT EKLFSNLSAI YSNYNYKFDF
NWIDMIWTSG IENFNLKYDF KNYVSEKFKF TYGFQGLYYT FKPGKVLPKS PASTIKEKVL
DHKYAAETAF YIDAEQKLGD ALTVSYGVRL SSFYHLGKRT VNVYKDDNPV IFNASRQIYQ
KATPIGTKYY GSNRIINLYS NFEPRFTMSY AFNDNKSIKA SYARTAQYVH LISNTASPSP
LNVWAPSDEF IKPQLADQVA LGYASNFSDD KYSIEVETYY KKVQNRLDYI DGANLIANEA
IEQVLLTGEN RAYGLELLLR KNTGKLTGWI AYTLSKSEMQ TKGRTSEEIG INYGDWYSAP
YDKPHDVSIT ATYELSAKWT FGAVFNFQSG LPTNYPVGRY NYLGMSVPDY SKRNEYRLPT
YHRLDLSATY TPQRPNKRWK SEWVFGIYNV YNRKNAVSVS FRENLDTHKN EAVKLSIFGI
IPSVTYNFSF
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