| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1581 |
|---|
| Symbol | |
|---|
| ID | 8368026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1885655 |
|---|
| End bp | 1887010 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 644984020 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_003141687 |
|---|
| Protein GI | 256820408 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.301204 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAAAA CAAAAATTTG GTCAGCACTT GTAATATTGT TGTTCACTAC TCCTTTTTTT
GCCCAAAACA ATGAGCGCAG AAAGGTAGAT GGTGTAGCAG CGGTAGTAGG TGATTATTTG
ATTTTAGAAT CAGATATCGA CAAGGCGTAT ATTGATTTGC AACAGCAAGA GGTAGACACT
CGTGAAATCA ACCGTTGCCA GATGCTCGGC AAACTGATGG AGGATAAACT CTACGCTCAC
CAAGCTGTGC AAGACAGTGT GAAGCTCACC GATAGCGAAG TACGTGACCA AGTGAACCAA
CGTATTGAGT TTTTGACCGC TCAGTTAGGT GGCGACATTA AGAAACTTTT AGAGTTCTAT
AAAAAAGACG ACGAACAATC TATGCGCGAT GAGCTTTTCA ACCTCCTAAA AGTGAGTATG
CTCGCTCAGC GTATGAAACA ACAAATTATA AAAGATATAG AAGTAACTCC TGAGGAAGTA
CGTACTTTCT TCAACGCTAT TCCAGCCGAT GAACGTCCGC ACTTTGGTAC TGAATTAGAA
ATCGCTCAAA TTGTAGTCAA TCCTGTAGCT CCCAAAAGTT CGGTACAAAA AGTAATAAAC
CAACTCAACG ATATTAAAAA AGATGTAGAG GAAAACGGTA TGAGTTTTTC TACCAAAGCC
ATTCTCTACT CCCAAGACCG CGCTACTGGC GGACAAGTAC TCACCTTCAA CCGTAACTCT
GCTTTTGATA AAGCTTTTAA AGACGTAGCC TTCACTCTGC GGGAAGGAGA AATATCTAAG
CCCTTTGAGT CTAGCTTCGG TTGGCATATT ATCCAAATGG ACAAGATTCG CGGTAAGGAA
GTGAGTGTAC GACACATCTT GTTAATGCCT GAAATTCCTC AAGAAGCTCT CAACGAGGCT
AAAGAGAAGA TAGCCAAAAT ACGCGACCGT ATTGTAAACA AAGAGCTTAC TTTCGACGAG
GCTGCACGTA ATTTCTCCGA TGAAAAAGAA ACCCGCAACG ATGGCGGTCA GCTTATCAAC
CCCGAAGACC TTTCTACTCG TTTTGAGCTT ACCCGTATAG AGCCTACACT TTACGCTCGC
ATTTCAGACC TTAAAGACAA TGAGGTATCA GTACCTTTCC TCGACGAAGA TAGAACAGGC
AAAAAAACTT ATAAGATTTA CCAAATCACC AACCGTATTG AGGAACACCA AGCCGACTTT
GTAAAGGATT ACGTAAAGAT ACAAGATTTA GCTCTGAAAG AAAAACAACT GAAAGCCATC
AGTAAGTGGA TGAAAGAACA TATCGAGAAA ACTTACATTT CAGTAAACGG AGAATACAAG
AACTGTAAGT TTGAAAACAA TTGGCTTAAG AAATAA
|
|---|
| Protein sequence | MNKTKIWSAL VILLFTTPFF AQNNERRKVD GVAAVVGDYL ILESDIDKAY IDLQQQEVDT
REINRCQMLG KLMEDKLYAH QAVQDSVKLT DSEVRDQVNQ RIEFLTAQLG GDIKKLLEFY
KKDDEQSMRD ELFNLLKVSM LAQRMKQQII KDIEVTPEEV RTFFNAIPAD ERPHFGTELE
IAQIVVNPVA PKSSVQKVIN QLNDIKKDVE ENGMSFSTKA ILYSQDRATG GQVLTFNRNS
AFDKAFKDVA FTLREGEISK PFESSFGWHI IQMDKIRGKE VSVRHILLMP EIPQEALNEA
KEKIAKIRDR IVNKELTFDE AARNFSDEKE TRNDGGQLIN PEDLSTRFEL TRIEPTLYAR
ISDLKDNEVS VPFLDEDRTG KKTYKIYQIT NRIEEHQADF VKDYVKIQDL ALKEKQLKAI
SKWMKEHIEK TYISVNGEYK NCKFENNWLK K
|
|---|
| |