| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1552 |
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| Symbol | |
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| ID | 8367996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1844593 |
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| End bp | 1845834 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644983991 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_003141658 |
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| Protein GI | 256820379 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00281859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATCAAG AAAACAAACC ACAATATCGC ATTTTACTGC TTATCGCCTT AGCACACGGA
CTCAATGACC TCATTCAAGG GGTCATTCCG TCTATTTATC CTGCTCTGCA AAGCAAATAT
GCTCTCACAA TGACGCAAGT AGGGGTTATT ACACTCTGTT ACCAACTATC AGCCTCTATA
TTGCAACCCT TAGTAGGCAA TTATACCGAT AAGCACCCTA AGCCCTACTC ACAAGTATTA
GGAATGGCAT TTACTACTAT GGGAATCGTG AGTTTATCGC TTTCGAGTAA CTATACAGCT
ATACTGTGCT CGGTGGTATT CATAGGGGTA GGTTCATCGG TATTCCACCC CGAATCGTCC
AGAGTAGCAT TTTTAGCCTC AGGAGGCAGA CGCTCGTTCG CACAAGCTAT CTTCCAGTTG
GGTGGTAACT TTGGGACAGC CTTAGCCCCT CTATTGGTGA TATTACTATT GTTCAGCAAA
AAAATAATCG ACGGACGAGT TGTAGAAGAA AGTCATCAAG GCAATTTAAT ATGGTTTGCA
GGGTTCTCTA TCTTTGCAAT GCTCATACTG CTCCTCATAG GCAAATGGCG TAGCATTCTG
CTTAAATTGC TCAAAAAGAA AGCTAAAAAA CCTGTAGTGT TGCCCAATCT CACCCGTGCA
CAAATACGCA ACTCTATGAT TATATTGATG TTGTTAGTAT TCTCCAAGAA CTTCTATACA
GCAGCTATCA ACAATTATTT TCAGTTTTAT ACTATTAAAA AATTCGGATT TAGTAATGCT
GAGGCACAAG TATACCTATT TTACTTTTTA GGAGCGGTAG CTGCGGGCTC ACTTGTTGGA
GGGTTTTTAG GTGATAAAGT AGGAAGAAAA TTTATTATTT GGTTTTCAAT CTTAGGGGCT
GCCCCCTTTG CGCTTTGGTT GCCTTACGCC GATGCTACCA CTACGGCAGT ACTCATCGTG
CTGATAGGGT TTATCATCTC ATCGGCTTTT GCCTCTATTT TAGTCTATTC ACAAGAGCTT
TTGCCCCAGA AAATAGGAAT GATTTCAGGC TTTTTCTACG GTTTTGCTTT TGGTATGGGC
GGATTGGCTT CGGCAGTATT AGGCAAATTG ATAGACATAA CCAGTATTGA CTTCGTTTAT
AAACTATGTT CTTTCTTGCC TTTGATGGGG CTTATTGCAT ACTTTTTGCC AAACTTATCT
TCTGTATCTC TTTCTCAAAA ACAGACACGA ACAACCCCAT AA
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| Protein sequence | MYQENKPQYR ILLLIALAHG LNDLIQGVIP SIYPALQSKY ALTMTQVGVI TLCYQLSASI
LQPLVGNYTD KHPKPYSQVL GMAFTTMGIV SLSLSSNYTA ILCSVVFIGV GSSVFHPESS
RVAFLASGGR RSFAQAIFQL GGNFGTALAP LLVILLLFSK KIIDGRVVEE SHQGNLIWFA
GFSIFAMLIL LLIGKWRSIL LKLLKKKAKK PVVLPNLTRA QIRNSMIILM LLVFSKNFYT
AAINNYFQFY TIKKFGFSNA EAQVYLFYFL GAVAAGSLVG GFLGDKVGRK FIIWFSILGA
APFALWLPYA DATTTAVLIV LIGFIISSAF ASILVYSQEL LPQKIGMISG FFYGFAFGMG
GLASAVLGKL IDITSIDFVY KLCSFLPLMG LIAYFLPNLS SVSLSQKQTR TTP
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