Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1523 |
Symbol | |
ID | 8367963 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1810299 |
End bp | 1812098 |
Gene Length | 1800 bp |
Protein Length | 599 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644983958 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_003141629 |
Protein GI | 256820350 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACTTAA CAGCCTATCA CTTTGTATCG CTGTTTCGGA ATAATGTACA GCAATACCCA CAGAAAGACG CTTTGATGGG AAGAGTCGCT TCTTCTCATT GGAAAGGTAT TACGTGGGAG ACCTTAGGCA GTACCACAAC CCTTTTATCT AAATCTCTGC TTTCATTGGG TATCCAGCCC CAAGAAACTG TAGGGATTCT TGCACAGAAT ACCCCACAAT GGTCGCTTGC CGACCTTGCT TGCTTGCAAA TACGTGCCAT TCCGGTACCC ATATATACTA CAAATACCGC CGAACAAGCT CTCTACGTGA TGAACCACGC TGAGGTGAAA GTGCTGTTTG TGGGCGATGA AAAGCAATAC CACAAAGCTC TTGAAGTAGC CTCTCAGTGC CCCACCTTGC AAATGATTGT GGTATGTGAT AACGAAGTGC CTCTTACCGA AAAACAGTAT TCTATTCACT GGAACGACTT TTTGGCACTC GGCAATAGTC CGCAGTATGA CACAGAGTTA GACAAGCGCA TTGCAGAACG CAATTTAGAT GACCTTTTTA CGATTATTTA CACTTCGGGT ACTACGGGTG AGCCCAAGGG AGTAATGCTC ACTTATGAGA ATTTGGCTTT CCAGATGGTA GGACATACCG AGCGCTTATC TACCGTAGAT AACACTGATA CGTCATTGGC TTTCTTGCCA CTATCGCACG TATTTGAACG CGCGTGGACG TACTTCTGCC TTTACAAAGC AGTTACTGTT TATTACTTAG ATGATACTAA CTTAGTGCGC GAAGCCCTTG CTGAGGTACG TCCTACCTTG ATGTGTGCTG TACCGCGCTT CTACGAAAAG ATATTTGCCA CCGTACACGA CCGAGCTGAC GCATCGTCAT TTGTAAAGCG TAAGCTCTTC CGCTTGGCAA TAGCTACTGG TAAACGAGTA TTGGCATTAC GCGAACAAGG TAAGAAACCG TCGTTTGTCT TACAGAAAGC TTATAACCTT TTTGATAAAA TGGTGTATAA GAAACTGAAA GAGGCTCTTG GTGGACGCAT TAAGTTTATG CCTTGTGGAG GGGCTAACCT CGAACCTAGT ATCGGGCGTT TCTTTCAGTC GATAGGTATT AACCTGAAAT TAGGTTATGG GATGACCGAA ACGACTGCTA CTATATCTTG TTGGGGCGAC GATCGTATCA ACCCACAATC GGTAGGGAAT GTGATGCCTA ATGTGCAAGT GCGGATAGGA GAAGAGAACG AGATATTGGT AAAAGGAGGA ATGGTGATGA AGGGTTACTA CAAGAACCCT GAAGAAACCG CCAAAGCTTT TACTCCCGAT GGTTATTTGC GTACGGGTGA TGCGGGTAAT TTGGACGGAA ATAACAATCT CTTTATCACC GAACGCATTA AAGAACTGAT GAAGACTTCT AATGGCAAAT ACATTGCTCC ACAGATGATT GAAGGCAAGG TAGGGAAGTA TAACCTTATA GAACAAATAG CCGTGATTGC TGATGGTAAG AAGTTTGTTT CTGCCCTTAT TGTACCTAAC TACGAGATGC TCTCACAAGC ACTAAAAGAT CTCAACCTTA AGTATAAAAA CACGGCAGAT ATGATAAAGC ATAGCCAAGT GATTGAATAC ATAGGCAAGC AACTACAAAA ATTTCAGAAA GACCTACCCG ACTACGAGCA GATTAAAAAG TTTACGCTTC TGCCTTCGGC TTTTACTATT GAGCGTAATG AGATTACTCC TTCGCTCAAA CTCAGAAGAA AAGTGATTTA TGCCAATTAT AGTCGTGAAA TAGAGGCGAT GTACAGATAA
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Protein sequence | MDLTAYHFVS LFRNNVQQYP QKDALMGRVA SSHWKGITWE TLGSTTTLLS KSLLSLGIQP QETVGILAQN TPQWSLADLA CLQIRAIPVP IYTTNTAEQA LYVMNHAEVK VLFVGDEKQY HKALEVASQC PTLQMIVVCD NEVPLTEKQY SIHWNDFLAL GNSPQYDTEL DKRIAERNLD DLFTIIYTSG TTGEPKGVML TYENLAFQMV GHTERLSTVD NTDTSLAFLP LSHVFERAWT YFCLYKAVTV YYLDDTNLVR EALAEVRPTL MCAVPRFYEK IFATVHDRAD ASSFVKRKLF RLAIATGKRV LALREQGKKP SFVLQKAYNL FDKMVYKKLK EALGGRIKFM PCGGANLEPS IGRFFQSIGI NLKLGYGMTE TTATISCWGD DRINPQSVGN VMPNVQVRIG EENEILVKGG MVMKGYYKNP EETAKAFTPD GYLRTGDAGN LDGNNNLFIT ERIKELMKTS NGKYIAPQMI EGKVGKYNLI EQIAVIADGK KFVSALIVPN YEMLSQALKD LNLKYKNTAD MIKHSQVIEY IGKQLQKFQK DLPDYEQIKK FTLLPSAFTI ERNEITPSLK LRRKVIYANY SREIEAMYR
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