Gene Coch_1507 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1507 
Symbol 
ID8367945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1789594 
End bp1790436 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content42% 
IMG OID644983941 
Productpantoate/beta-alanine ligase 
Protein accessionYP_003141614 
Protein GI256820335 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0414] Panthothenate synthetase 
TIGRFAM ID[TIGR00018] pantoate--beta-alanine ligase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTACA CACACCAAAA GGAACTCCAT AACCTGTTGG AAACCCTTAA AAATCAAGGA 
AAAACGATTG GTTTAGTACC TACTATGGGC GCTTTACACG ACGGACATTT ATCACTCATA
AAAAAAGCTA AACAAGAGAA TGATATAGCG GTAGTGAGCA TTTTTGTGAA CCCTACGCAG
TTCAACAATC CTACCGATTT GCAGAAATAC CCGCGCACCT TAGAAGCCGA TGCCCAAAAG
ATTGCTCAGT TCAGTAAAGA GATACTCATT TATGCCCCTA CCGTAGCCGA TATTTATGGC
GAAGAAGTAG TCGCTGAACC TTTTGACTTT GCAGGATTAG ACAAAGTGAT GGAAGGTACT
TCTCGTCCTG GTCATTTCGA TGGTGTAGGC ACGATTGTTA AAAAACTTTT TGAGATTGTA
ATGCCCGATA GAGCTTATTT TGGTGAAAAA GATTACCAAC AACTGCTTAT TATTCAGCAA
ATGGTACGAC AAACGGGCTT GTCAGTAACC ATTGTTCCTT GCCCAATCGT GCGCAATGCC
GATGGTTTGG CTCTCAGCTC CCGCAATGCT CTCCTCAGCG AGTCGATAAA ACAGCGCGCT
ACCATTATTT ACAACACTCT ACTCGCTGCC AAAGAACGTT TTGCTACTCA TAGCCCTGCT
GAAGTAGAAA TCTGGGTAAA AGAAGTCTTT GCTCAACAGC CCGACTTCAC CTTAGAATAT
TTTACCATTA CCGATGCGCA TACATTGCAA CCTATTACCA AAAAAGAAGC AGGTAAAGAC
TACCGTGCTT TTATAGTCGT ACACGCCGAG GGAGTAAGAT TGATTGATAA CCTTGCTTTT
TAG
 
Protein sequence
MIYTHQKELH NLLETLKNQG KTIGLVPTMG ALHDGHLSLI KKAKQENDIA VVSIFVNPTQ 
FNNPTDLQKY PRTLEADAQK IAQFSKEILI YAPTVADIYG EEVVAEPFDF AGLDKVMEGT
SRPGHFDGVG TIVKKLFEIV MPDRAYFGEK DYQQLLIIQQ MVRQTGLSVT IVPCPIVRNA
DGLALSSRNA LLSESIKQRA TIIYNTLLAA KERFATHSPA EVEIWVKEVF AQQPDFTLEY
FTITDAHTLQ PITKKEAGKD YRAFIVVHAE GVRLIDNLAF