Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1507 |
Symbol | |
ID | 8367945 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1789594 |
End bp | 1790436 |
Gene Length | 843 bp |
Protein Length | 280 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644983941 |
Product | pantoate/beta-alanine ligase |
Protein accession | YP_003141614 |
Protein GI | 256820335 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0414] Panthothenate synthetase |
TIGRFAM ID | [TIGR00018] pantoate--beta-alanine ligase [TIGR00125] cytidyltransferase-related domain |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTACA CACACCAAAA GGAACTCCAT AACCTGTTGG AAACCCTTAA AAATCAAGGA AAAACGATTG GTTTAGTACC TACTATGGGC GCTTTACACG ACGGACATTT ATCACTCATA AAAAAAGCTA AACAAGAGAA TGATATAGCG GTAGTGAGCA TTTTTGTGAA CCCTACGCAG TTCAACAATC CTACCGATTT GCAGAAATAC CCGCGCACCT TAGAAGCCGA TGCCCAAAAG ATTGCTCAGT TCAGTAAAGA GATACTCATT TATGCCCCTA CCGTAGCCGA TATTTATGGC GAAGAAGTAG TCGCTGAACC TTTTGACTTT GCAGGATTAG ACAAAGTGAT GGAAGGTACT TCTCGTCCTG GTCATTTCGA TGGTGTAGGC ACGATTGTTA AAAAACTTTT TGAGATTGTA ATGCCCGATA GAGCTTATTT TGGTGAAAAA GATTACCAAC AACTGCTTAT TATTCAGCAA ATGGTACGAC AAACGGGCTT GTCAGTAACC ATTGTTCCTT GCCCAATCGT GCGCAATGCC GATGGTTTGG CTCTCAGCTC CCGCAATGCT CTCCTCAGCG AGTCGATAAA ACAGCGCGCT ACCATTATTT ACAACACTCT ACTCGCTGCC AAAGAACGTT TTGCTACTCA TAGCCCTGCT GAAGTAGAAA TCTGGGTAAA AGAAGTCTTT GCTCAACAGC CCGACTTCAC CTTAGAATAT TTTACCATTA CCGATGCGCA TACATTGCAA CCTATTACCA AAAAAGAAGC AGGTAAAGAC TACCGTGCTT TTATAGTCGT ACACGCCGAG GGAGTAAGAT TGATTGATAA CCTTGCTTTT TAG
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Protein sequence | MIYTHQKELH NLLETLKNQG KTIGLVPTMG ALHDGHLSLI KKAKQENDIA VVSIFVNPTQ FNNPTDLQKY PRTLEADAQK IAQFSKEILI YAPTVADIYG EEVVAEPFDF AGLDKVMEGT SRPGHFDGVG TIVKKLFEIV MPDRAYFGEK DYQQLLIIQQ MVRQTGLSVT IVPCPIVRNA DGLALSSRNA LLSESIKQRA TIIYNTLLAA KERFATHSPA EVEIWVKEVF AQQPDFTLEY FTITDAHTLQ PITKKEAGKD YRAFIVVHAE GVRLIDNLAF
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