| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1483 |
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| Symbol | |
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| ID | 8367920 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1758313 |
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| End bp | 1761243 |
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| Gene Length | 2931 bp |
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| Protein Length | 976 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644983916 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003141590 |
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| Protein GI | 256820311 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.430226 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAAAGA CTTATTTACT AATTACTTTT TTAAACTTAT CACTATTTAC TACACTTGCC
CAAAATAAAT CTCCTTTAAC AACTACCGAT GCCCAAGCGC AACAGCAGTG GGTGAACGAC
ACTTATAACA AAATGAGCCT TGATGAAAAG ATTGGGCAAC TGTTTATGGT ATCGGTATTT
TCAAGCCATA TAGGCACAAA AAAAGCCGAA GAGGTAAAAG ACTTCATAAA GAAATACTAC
ATTGGAGGGA TTATCTTCTC CAAAGGAGGA CCGAAGCGTC AGGCAAAGCT CACCAATGAA
TACCAAGCAC TCTCTAAAAT TCCGCTTTTT ATGGCAATGG ATGCCGAGTG GGGATTGGCG
ATGCGCTTGG ACTCTACTTA TGCTTACCCG TGGAATATGA CCCTTGGGGC AATCAAAGAT
AACTATCTTG TAGAACGTAC CGGTAGACGT ATAGGGTTAC ACTGCAAGCA ATTGGGTATG
CAGTTTAACT TTGCTCCTGA TATTGATATT AACACAAATC CGAATAACCC TATTATAGGA
AATCGTTCGT TTGGCGAGGA TAAAGAGAAT GTAACCCAAA AAGGGCTTGC TTTTACTCGC
GGAATGCAGT CGGTAGGGGT GCTGGGCAGT GCCAAACACT TTCCTGGTCA CGGTGATACT
TCTAAAGATT CTCATAAAAC TTTACCGCTT GTATCTTTCG CTGCTAACCG TATTGACGAG
GTAGAACTTT ACCCTTTTAA AGCCCTCATC AGAGAAGGAA TAGCGAGCAT AATGGTAGGG
CATCTCAATA TTCCTTCCTT AGAACCTAAA ACAGGGTTAC CTTCCTCGTT ATCAAGTGCT
ATTATCACTG ATTTACTCAA AAAGAAATTA GGCTATCAAG GGCTTATCTT TACCGATGCA
CTTGGTATGA AAGGGGTATC GGAATACTTG CCCGTAGGCG AAGTGGAAGT AGAAGCCTTC
TTGGCGGGTA ACGATATTTT GCTGATGCCA GCTAATGTAG CTAAGGGTTT TGAGGCAATG
AAGAAAGCCT ACCAGAACAA ACGCATCAGT GAGGAACGCT TAGCACATTC AGTAAAGAAA
ATACTAATGG CTAAATACAA AGTGGGGCTC ACATCTTTTA AACAGCTAGA CGAAAGCACT
GTAACCTCTA CCTTGCACAC AATAGAAGAC GATTTGCTCA CTGAGGAACT GTTTGAAAAT
GCGATTACGG TAGGGCAAAA CAAGGAAAAT ATACTGCCTA TAAAAGACTT GGACAAGCGC
AAAATAGCCT ATGTGAAGTT TGGCAACGAC AGTGGTTGGG CGTTTTATTC CACTTTACGC
AAATACGCAG AGACCGTGCT TATTGAGCCT AAGAATGAGG CACAGCTATA TGAAGCAGTT
GAACCTTTTG ACACGATTAT CATCGGGTTG CACAAACCAG ATAAGACCCC TTGGGACGCA
TACAAGTTTA CAGAGAACGA ACTGAAATGG TTAGAGCATA TTGCTAAGAA AAAAAAGGTA
ATCCTCGCAG TGTTTACTCG CCCCTATGCG ATGCTCGACG TGAAAAATAT AGCTCCTATT
AAAGCTATTG TATTTGCTTA CCAAAATAAC AAAGTAGCCC AAGAGAAAGC CGCTCAGCTC
ATCTTTGGTG CTATTGAGGG TAAAGGAGTT TTGCCTGTAA CAGCACACCC TAACTTACCC
GTAGGCACTT CAATTGCTAC TCCCAGAATA GGACGCTTAG CTTACGGCTT ACCTGAAAGC
GTGGGGCTCA ATTCTCTTAA ACTAAAAGAG ATAGACAGTA TTGCTCTTGA TGCTGTAGCA
CAAAAGATGA CACCCGGGAT GCAAGTATTG GTTGCCAAAA GAGGAAAGGT AGTTTATCGC
AAGAATTTTG GTACTTTAGA TTACAATCCA GCCAATAAAG TGACCGACAA CACTATTTAC
GACCTCGCTT CGCTTACGAA GATATTGGCT ACTCTTCCCG AATTGATGCG TCTTTATGTG
CGTGGAGATT TCAAACCCGT AGATACTTTT GAGGATTTGC TACCCAAGCT CAAACATACA
AACAAGGGAG ATTTGGTAAT GAAAGATGTG CTCTCGCACT ATGCTCAGTT CCAGTCGTGG
ATTCCTTTTT ACCGAAAAAC CTTAGACATT GATAAAAAGC CTTCGCCTGA GTATTACAGC
ACTACCAAAA GTGATTCTTT CCCTACTGAG GTAGCCAAAG ACTTATATCT TAGAGAAGGA
TATGCTGACA GTATTTATAA AACAATTGAC GAGAGTGAAC TTATCAAAGA TAAAAAGTAC
TTGTATAGCG ACCTCCCTTA TTATTATTTC AAGAAGTACA TAGAAAAAAA AAACAAGAAG
CCCCTACAAG AAATCGTTCA GAAGCACTTT TATAGAGGTT TAGGAGCCTA CCAGCTTACT
TTTCTTCCTT TGCAACGCTT CTCTCCTGTA AATATTGCAC CTGCCGAAGA TGAAAAGACC
TTTCGTTCTC AGGAGCTTCG AGGGTACGTA CACGACCAAG GAGCAGCCCT TTTAGGAGGG
GTTGGTGGAC ACGCAGGACT TTTTGGAACT GCCGACGATG TAGCCAAAGT GATGCAAATG
TACCTCCAAC AAGGGTATTA CGGTGGTACG TGGTTCTTGC AACCTCAGGC TATAAAAATC
TTCAACACTT GTAACTACTG TCCAGAAGGT AACCGTCGAG GTTTAGGATT TGATAAGCCA
CAGTTAGGCA AATCAGGTCC TACTTGTGGT TGTGTGCCAA TGGATAGCTT TGGACATACC
GGTTTTACGG GTACTTTTGC GTGGGCTGAC CCCACTAATG AAATAGTAAT AGTTATCCTC
TCGAACCGCA CTTATCCCTC TTCTGACAAT AAACTTTTGG TAAACCGATT GGTGCGCCAA
AAGATACAAG GAGTGGTGTA CCAAGCCCTA TCTGCGAATA AAAACTTTTA A
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| Protein sequence | MRKTYLLITF LNLSLFTTLA QNKSPLTTTD AQAQQQWVND TYNKMSLDEK IGQLFMVSVF
SSHIGTKKAE EVKDFIKKYY IGGIIFSKGG PKRQAKLTNE YQALSKIPLF MAMDAEWGLA
MRLDSTYAYP WNMTLGAIKD NYLVERTGRR IGLHCKQLGM QFNFAPDIDI NTNPNNPIIG
NRSFGEDKEN VTQKGLAFTR GMQSVGVLGS AKHFPGHGDT SKDSHKTLPL VSFAANRIDE
VELYPFKALI REGIASIMVG HLNIPSLEPK TGLPSSLSSA IITDLLKKKL GYQGLIFTDA
LGMKGVSEYL PVGEVEVEAF LAGNDILLMP ANVAKGFEAM KKAYQNKRIS EERLAHSVKK
ILMAKYKVGL TSFKQLDEST VTSTLHTIED DLLTEELFEN AITVGQNKEN ILPIKDLDKR
KIAYVKFGND SGWAFYSTLR KYAETVLIEP KNEAQLYEAV EPFDTIIIGL HKPDKTPWDA
YKFTENELKW LEHIAKKKKV ILAVFTRPYA MLDVKNIAPI KAIVFAYQNN KVAQEKAAQL
IFGAIEGKGV LPVTAHPNLP VGTSIATPRI GRLAYGLPES VGLNSLKLKE IDSIALDAVA
QKMTPGMQVL VAKRGKVVYR KNFGTLDYNP ANKVTDNTIY DLASLTKILA TLPELMRLYV
RGDFKPVDTF EDLLPKLKHT NKGDLVMKDV LSHYAQFQSW IPFYRKTLDI DKKPSPEYYS
TTKSDSFPTE VAKDLYLREG YADSIYKTID ESELIKDKKY LYSDLPYYYF KKYIEKKNKK
PLQEIVQKHF YRGLGAYQLT FLPLQRFSPV NIAPAEDEKT FRSQELRGYV HDQGAALLGG
VGGHAGLFGT ADDVAKVMQM YLQQGYYGGT WFLQPQAIKI FNTCNYCPEG NRRGLGFDKP
QLGKSGPTCG CVPMDSFGHT GFTGTFAWAD PTNEIVIVIL SNRTYPSSDN KLLVNRLVRQ
KIQGVVYQAL SANKNF
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