Gene Coch_1463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1463 
Symbol 
ID8367900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1727513 
End bp1728859 
Gene Length1347 bp 
Protein Length448 aa 
Translation table11 
GC content44% 
IMG OID644983896 
Productcytochrome bd ubiquinol oxidase subunit I 
Protein accessionYP_003141570 
Protein GI256820291 
COG category[C] Energy production and conversion 
COG ID[COG1271] Cytochrome bd-type quinol oxidase, subunit 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACAG AAATTTTAGC ACGGGTGCAG TTCGCACTGA CGATTGCTTT CCATTACATC 
TATCCGCCTT TAAGTATAGG GCTTGGACTA CTAATGGTAG CCTTTAAAGG TATCTACCTA
CGCACTGGTA AAAAAGAGTA CGACACGCTC GCCCGCTTCT GGACGCGCAT CTTTTCACTT
ACCTTTGGCT TAGGAGTCGC TACAGGGATT GTAATGGAAT TTGAATTTGG TACCAACTGG
GCTACCTATT CGCGTTATGT AGGTGATATC TTCGGTAGTG CTTTGGCGGC TGAGGGTGTT
TTTGCTTTCG CTTTAGAGAG TACCTGCCTT GGTATTGTAC TTTTCGGTTG GAACAAAGTA
AAGCCTATAT GGCACTTCTT GGCTACCCTT GGGGTGTTCT TAGGTTCTAT GTGTTCTGCT
ATCTGGATAG TAATAGCCAA CAGCTGGCAA CAAACCCCCG CAGGTTATGT AATTGCAGGT
GAAGGTATGC AAGCCAAAGC CGTAATCACC GACTTTTGGG CGATGGTGTT CAATCCTTCG
AGCATAGACC GTATATGGCA CGTGTGGCAA GGAGCTTTCT TGGCTGGTAT CTTCTTGGTA
TTGAGCGTTC ACGCTTGGTA TTTACTCAAA GGGCGCCACG TAGAAATCTC TAAAAAAGCC
TTTAAAGTAA CTCTTATCAT CGGTACCATT GTGTGCTTGT TGCAATTGGT TTCAGGACAC
AGCTCAGCTG ATGGTGTAGC TAAAAACCAG CCTGAGAAAT TAGCTGCTAT GGAAGGGCAC
TTCAAAACAG GCTCTGGCGA TGCTTACATT ATTGGTTGGG TAGATAAAAA GAATGAGGAA
ACTCACGGGT TGAGTATTCC TAAGGGGCTT TCGTATATGG TGCATTTTGA CGGCGATGCT
CCTGTAACAG GTCTTGACCA ATATCCAGTG GAAGACCGTC CAGGACAAGT GAATGCTGTA
TTCCAATTCT ATCATATAAT GGTAGCTATT GGTATGTTTC TCATCGCACT CACTCTCTAC
GCTTCTTTCC TATTGTGGAG AGGCAAATTA TACAACAAAC GTTGGCTCTT GCACATTTTC
GTATGGAGTG TACTATTGCC ACAAATAGGT AATCAAGTAG GTTGGTTTGC AGCCGAAATG
GGTCGCCAGC CTTGGATAGT GTACAAACTC TTGCGCACGA GCGAAGCCCT TTCTAAATCG
GTATCGGCTA ACCAAATACT CTTTGCGATT ATCTTATTTA CTGTTATTTA TATCATCCTC
TTCGCTCTAT TCATCTACTT GATGAACAAG AAAATCGTTC ACGGTATAGA TGAACACGAA
ACTCAAGAAC AATTACAAAC AGCATAA
 
Protein sequence
METEILARVQ FALTIAFHYI YPPLSIGLGL LMVAFKGIYL RTGKKEYDTL ARFWTRIFSL 
TFGLGVATGI VMEFEFGTNW ATYSRYVGDI FGSALAAEGV FAFALESTCL GIVLFGWNKV
KPIWHFLATL GVFLGSMCSA IWIVIANSWQ QTPAGYVIAG EGMQAKAVIT DFWAMVFNPS
SIDRIWHVWQ GAFLAGIFLV LSVHAWYLLK GRHVEISKKA FKVTLIIGTI VCLLQLVSGH
SSADGVAKNQ PEKLAAMEGH FKTGSGDAYI IGWVDKKNEE THGLSIPKGL SYMVHFDGDA
PVTGLDQYPV EDRPGQVNAV FQFYHIMVAI GMFLIALTLY ASFLLWRGKL YNKRWLLHIF
VWSVLLPQIG NQVGWFAAEM GRQPWIVYKL LRTSEALSKS VSANQILFAI ILFTVIYIIL
FALFIYLMNK KIVHGIDEHE TQEQLQTA