Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1420 |
Symbol | |
ID | 8367852 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1662937 |
End bp | 1664103 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644983848 |
Product | putative RNA methylase |
Protein accession | YP_003141527 |
Protein GI | 256820248 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00712049 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAATA ATTATAAAAT GGTAGCCAAA ACTTTCTTTG GCTTTGAAGA TATTTTAGCT GATGAATTGC GCAATTTAGG GGCTATGCAC ATAACCAAAG GCGTTCGCAG TGTACAGTTC GAAGGTGATA AAGGCTTTAT GTATAAGGCG AACCTCTGCT TGCGTACCGC TTTAAAAATA CTGAAACCTA TTGCTTCTTT TTATGTGCGT AGTGAGAAAG AATATTACCA AAAACTCTAT GACTTCAATT GGCAAACCTA CCTAAGAGTA GACCAGACCT TCGCTGTTAC AGCCACCTTA CAAACCGAAC TTTTTAATCA CTCTCAATAC GTGGCTTTAA AAGCCAAAGA TGCCATTGCT GATGCTTTTC GCAATGCCAC AGGTCGTCGT CCCAATGTAG ATGTACTACA CCCCGATTTG GAGATACATA TTCATATTCA GCGCAACGAA GTAATTGTGT CACTCGATAG TTCGGGCAAT TCCCTGCATC AGCGCGGGTA TCGTACAGCT ACCAATATAG CTCCTATCAA CGAGGTGCTC GCTGCTGGTA TCCTACTACT CAGCGGTTGG CAAGGGCAGT GTGATTTCTT AGATCCTATG TGTGGTAGTG GTACTTTTTT GATAGAAGCA GCTATGATAG CTTGTAATAT TCCAGCCAAT GTACACCGTA AAGAGTTCGC TTTTGAACGT TGGAACGATT TTGATGAAGA CCTCTTTAAT CTTATCTTTG GCAGTTGTAT TAAAAAAATA CGAGAGTTTC ACCACCAAAT TATAGGATAT GATAAAGCAC CGTCAGCAGT AGCCAAAGCC AAAGATAACT TAAAAAACGC CGACCTATCT GAGTACATTC AAGTATTCCA AAAAGACTTT TTTGCTACTG AAAAAGAAGA TAAACAGCAA CCATTACATA TGGTGTTCAA TCCTCCTTAC AATGAGCGCC TACAAACCGA TGTAGAACAG CTTTACTCAT CGATAGGCAA CACTCTTAAA CATCATTACC CCAATACCGA TGCGTGGTTT ATCACTTCTA ATTTAGAAGG TATAAAATAT GTAGGATTGC GTCCTTCACG AAAAATAAAG CTCTTTAATG GTAAATTAGA AAGCCGATTG TTACAATATA AGATGTACGA AGGAAGTAAG AAAGCTAAAA AACAAGCCGA AGAGTAA
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Protein sequence | MENNYKMVAK TFFGFEDILA DELRNLGAMH ITKGVRSVQF EGDKGFMYKA NLCLRTALKI LKPIASFYVR SEKEYYQKLY DFNWQTYLRV DQTFAVTATL QTELFNHSQY VALKAKDAIA DAFRNATGRR PNVDVLHPDL EIHIHIQRNE VIVSLDSSGN SLHQRGYRTA TNIAPINEVL AAGILLLSGW QGQCDFLDPM CGSGTFLIEA AMIACNIPAN VHRKEFAFER WNDFDEDLFN LIFGSCIKKI REFHHQIIGY DKAPSAVAKA KDNLKNADLS EYIQVFQKDF FATEKEDKQQ PLHMVFNPPY NERLQTDVEQ LYSSIGNTLK HHYPNTDAWF ITSNLEGIKY VGLRPSRKIK LFNGKLESRL LQYKMYEGSK KAKKQAEE
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