| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1361 |
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| Symbol | |
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| ID | 8367792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | - |
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| Start bp | 1600729 |
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| End bp | 1601703 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 644983788 |
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| Product | Lytic transglycosylase catalytic |
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| Protein accession | YP_003141468 |
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| Protein GI | 256820189 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGAAAA GAACGATACA ATATTTGCTC ACAGGTGGAG GAGTAGTTTT GCTCTCTGGT
TTTTTGGTCA ATGCAATGTC AGTTAAAAAA GAAGAAAACA ACATCTACGA ACAAGCAGAA
GCCGAAGTAG CCCAGAACCC TCTTTCAGCT CAAGAAACTC ATCATAAAAG CGATTTCTCT
AATGATTACA GAGTTTTTGC CATCGATTTA CCCGAAAAAT TAGACTTTGC TGGTGAAAGA
GTACCTTTGG AAGACCCCGA TGTACACGAG CGTTTAGACC GAGAGCTTAT CGTAAATACC
TATTGGCAAT CCAATACTTT GTTGGTGCTC AAGCGTGCTA ATAAGTACTT CCCTATCATC
GAACCTATCC TCAAACGCAA TAATATCCCC GATGATTTCA AATATTTAGC CATCATAGAA
AGCGGACTTA CCAATGCGGT ATCACCCTCT GGTGCAAGTG GCTTTTGGCA ACTTATGAAA
CCCGCCGCTC AAGAATACGG CTTAGAAGTA ACCGACCAAG TAGACGAACG TTATCACATA
GAAAAAGCCA CCCAAGCTGC CTGCGATTAT TTAAACAAAG CTAAGCGCAG TACAGGTTCG
TGGACGATGG CTGCCGCTGC TTATAATGCC GGTATCTCAG GAATGAATAA GCAAACTTCT
TTTCAAGAAA CTAATAATTA TTATGATTTA TGGCTAAGCT CCGAAACTTC ACGCTATGTT
TTTCGTATTT TAGCTCTAAA AGAGATAATG AAGCACCCTA AGAAGTACGG CTTCATCTTC
GAGAAGAAAC ATTTGTATAA CGAACTGCCC ACTTACAATG TAATGGTAGA TTCCACCATT
GAAAATCTCA CCCAATTCGC CAAGAGCCAG AACATCACTT ATAAAGACCT AAAACTATAC
AATCCTTGGC TACGCGATAA AAGGCTAGAT AATATAGACG GTAAAGCGTA TTATATCAGG
ATTCCCAAGA AATAG
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| Protein sequence | MMKRTIQYLL TGGGVVLLSG FLVNAMSVKK EENNIYEQAE AEVAQNPLSA QETHHKSDFS
NDYRVFAIDL PEKLDFAGER VPLEDPDVHE RLDRELIVNT YWQSNTLLVL KRANKYFPII
EPILKRNNIP DDFKYLAIIE SGLTNAVSPS GASGFWQLMK PAAQEYGLEV TDQVDERYHI
EKATQAACDY LNKAKRSTGS WTMAAAAYNA GISGMNKQTS FQETNNYYDL WLSSETSRYV
FRILALKEIM KHPKKYGFIF EKKHLYNELP TYNVMVDSTI ENLTQFAKSQ NITYKDLKLY
NPWLRDKRLD NIDGKAYYIR IPKK
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