Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1340 |
Symbol | |
ID | 8367771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | - |
Start bp | 1572977 |
End bp | 1573981 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644983767 |
Product | virulence protein |
Protein accession | YP_003141447 |
Protein GI | 256820168 |
COG category | [R] General function prediction only |
COG ID | [COG3943] Virulence protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACACAC AACAAAAAAT CATCATTTAT AAGACCGACG ACGGTAAGGT GAAAATCTCT CTTTTTGCCA AAGACGGCTC GGTATGGTTG AACCAAAATC AGCTTGCTGA CCTTTTTGAC ACCTCTGTTC CTAATATCAG TATGCACATA TCTAATATAC TAAAGGATAA TGAATTATCT CCAAATTCAG TTATTAAGAA TTACTTAACA ACTGCCTGTG ATGGGAAGAA TTATGAAGTT ACTTTTTACA GTTTGGATAT GATTCTGGCT ATTGGATTTA GGGTGCGTAG TAAGCGAGGA GTTCAGTTCA GGCAATGGGC TAACCAGTAC TTGAAAGAAT TTATGGTGAA GGGATTTGTG ATGGACGATG AACGGCTGAA AAACCCCGAT GGGCGACCTG ATTATTTCGA CGAATTACTC GCCCGTATTC GCGACATTAG AGCTTCGGAA AAACGCTTCT ACCAAAAAAT AAGAGACTTA TTTATGCTCA GTAGCGATTA TGATAAAACC GATAAGGCGA CCCAGATGTT TTATGCACAA ACTCAAAATA AAATTCTATA CGCTATCACA GGTCAAACGG CTGCTGAATT GATTGTCAGT CGTGCTGATG CTTCGCAAAA CAATATGGCA CTTACCTCGT GGGAGGGAAA CATAGTGAGG AAAGGGGATA TTTACATAGC TAAGAATTAC CTTACTGATA ATGAGATTGA TAGCTTAAAT CGGTTTGTAA TGGTATTCTT AGAATCGGCG GAATTAAGAG CTAAAAACCG ACAAGACATT ACTATGGATT TCTGGCGTGA GAACATCGAT AGGATTATTG AATTCAACGA TAAAAAAGTA CTAAAAGGCA ATGGCTCAGT GAGCAACGAA CAAATGAAAA CAATAGTGAG AAAAGTGTAT GACGAGTTTG AAGTGAAACG GAAACAATAT GATGCTCAGC AAGCTGACTT AGAAGATTTA AAAGAAATAG AAGAATTAGA AGCGCATATA AAACTGCTAA AATAA
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Protein sequence | MNTQQKIIIY KTDDGKVKIS LFAKDGSVWL NQNQLADLFD TSVPNISMHI SNILKDNELS PNSVIKNYLT TACDGKNYEV TFYSLDMILA IGFRVRSKRG VQFRQWANQY LKEFMVKGFV MDDERLKNPD GRPDYFDELL ARIRDIRASE KRFYQKIRDL FMLSSDYDKT DKATQMFYAQ TQNKILYAIT GQTAAELIVS RADASQNNMA LTSWEGNIVR KGDIYIAKNY LTDNEIDSLN RFVMVFLESA ELRAKNRQDI TMDFWRENID RIIEFNDKKV LKGNGSVSNE QMKTIVRKVY DEFEVKRKQY DAQQADLEDL KEIEELEAHI KLLK
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