Gene Coch_1337 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1337 
Symbol 
ID8367768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1566956 
End bp1568476 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content35% 
IMG OID644983764 
Producthypothetical protein 
Protein accessionYP_003141444 
Protein GI256820165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTATTTAG CAATGAAAAC TAGACTAATG ATGTTAGCTT TAGCAGTGTT GACTTCAGCA 
ACCCTGTTTA GCTGCAAAAA AGACGATAAA GAGGGAGACT CTAATATAGT ATTAGGGAAG
AGTGCTGTAA CCCTTAACTT AGGAGGGCAA GAAACTATAA AAGTAACAGC CCCCGATGGT
ATCAAAAAAC CCCAATCTGA AGATGTAAAT GTGGCTATTG CTACTGTGGG TAGAGATATT
TGGGTTACTA TCCAAAGTAA ACAGAAAGTA GGAGAGACCC GTGTAAAAAT AGAAAGTAAA
ACCGGGAATA TAGCCTATAT CAATGTAACT GTAAAAGACA AAGAAACTAA TGATAGAGGT
TTAGTCGTTT TGGGTAAAAC CGTATTTGTT GATAGAGACC AAGAAGTAGA AGTTACTAAT
TTGCTCAAAA AATACAACGA TGTAATAGAT AAAGTAAATA TCAAATCTAC TTCATCTGCT
TTGGCACAAG TACGTAAAGA TGGAAATAGA TTTTTTGTAA AAGGAATAGG CGAGGGACTA
ACTGGTGAAG TATACTTTGA AGATACCGCA GGTGAGAACG ACAAGAAGAA GGGATTCCCT
AAAGGAAGTT TTATCGTACA CGTACGAGCT CCTTTCCTTG CAATACAAAG CGGTGAAGTA
GGAGTAGGGC AAACCAAACG TATTGATTTA ATCAATATCT ATAACAATGC CTTTACTTTC
GAAGGTGTAA ATAATGATAT TGCCACTGTT GAGTATGCAA GAGAATTAAG TGCAGGAACA
GAAATTCCAA ATGGTAGCTT TACAGGTATA AAAGTAACAG GTAAAAAAGC AGGCTCTTTT
GTGTTAAAGC TTATTAATAG CGATGGTGAT AACGGTAAAG GGAATGAAAT TAGCTTGACA
ATCAATGTTA CTGCTGTTGA TAATTCCGCT TATATAATAA AAGACGGCGT ACTTACAGGA
ATAAAAGCAG GTGTAAATTT AAAAGGAGCT ATAAAACTTC CTGAAAACGT TACAAAAGTA
GCAGCTACAG TCTTTAAGAA TCAACCTGAG CTTACCGAGA TTGATTTTAA TAATGTTACT
GAGATAGAAG GTAAAATATT TAGTGCAAAT GAAGATGATG TATTAGGTAT TAACGTTAAT
CTTACTTCTA TTACATTGCC TAAAGTAGTA AAAATAGGAG ATTCCTCTTT TAGAAATGCT
AAGAAATTAA CAAGAGTAGA ATTACCAGCT ACTTTAACTC ACTTAGGACA ATATGCATTC
AGTAATTGTA CTGCGTTACA ACACGTAGCT TTTAGAGGAA CAGTTCCTCC AAAAGGATTA
GGTGCTCTCC CTAAAACTAT TGTAAAAGGC AAACGTGAGC CAGCTCCAGA AAAACCTACC
GCTACAGATG CTTTTGATGC TGGTCAGATA CAATTATATA TACCTTTAGC AAGTAAGTCA
GCTTATAAAA ATGCTTTAGG AGAATCTCCT TTCCGTGCAG GAGGTATATA CAACCCTAAA
GATATTTCAG AATTTAAATA A
 
Protein sequence
MYLAMKTRLM MLALAVLTSA TLFSCKKDDK EGDSNIVLGK SAVTLNLGGQ ETIKVTAPDG 
IKKPQSEDVN VAIATVGRDI WVTIQSKQKV GETRVKIESK TGNIAYINVT VKDKETNDRG
LVVLGKTVFV DRDQEVEVTN LLKKYNDVID KVNIKSTSSA LAQVRKDGNR FFVKGIGEGL
TGEVYFEDTA GENDKKKGFP KGSFIVHVRA PFLAIQSGEV GVGQTKRIDL INIYNNAFTF
EGVNNDIATV EYARELSAGT EIPNGSFTGI KVTGKKAGSF VLKLINSDGD NGKGNEISLT
INVTAVDNSA YIIKDGVLTG IKAGVNLKGA IKLPENVTKV AATVFKNQPE LTEIDFNNVT
EIEGKIFSAN EDDVLGINVN LTSITLPKVV KIGDSSFRNA KKLTRVELPA TLTHLGQYAF
SNCTALQHVA FRGTVPPKGL GALPKTIVKG KREPAPEKPT ATDAFDAGQI QLYIPLASKS
AYKNALGESP FRAGGIYNPK DISEFK