Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1337 |
Symbol | |
ID | 8367768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1566956 |
End bp | 1568476 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 644983764 |
Product | hypothetical protein |
Protein accession | YP_003141444 |
Protein GI | 256820165 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATTTAG CAATGAAAAC TAGACTAATG ATGTTAGCTT TAGCAGTGTT GACTTCAGCA ACCCTGTTTA GCTGCAAAAA AGACGATAAA GAGGGAGACT CTAATATAGT ATTAGGGAAG AGTGCTGTAA CCCTTAACTT AGGAGGGCAA GAAACTATAA AAGTAACAGC CCCCGATGGT ATCAAAAAAC CCCAATCTGA AGATGTAAAT GTGGCTATTG CTACTGTGGG TAGAGATATT TGGGTTACTA TCCAAAGTAA ACAGAAAGTA GGAGAGACCC GTGTAAAAAT AGAAAGTAAA ACCGGGAATA TAGCCTATAT CAATGTAACT GTAAAAGACA AAGAAACTAA TGATAGAGGT TTAGTCGTTT TGGGTAAAAC CGTATTTGTT GATAGAGACC AAGAAGTAGA AGTTACTAAT TTGCTCAAAA AATACAACGA TGTAATAGAT AAAGTAAATA TCAAATCTAC TTCATCTGCT TTGGCACAAG TACGTAAAGA TGGAAATAGA TTTTTTGTAA AAGGAATAGG CGAGGGACTA ACTGGTGAAG TATACTTTGA AGATACCGCA GGTGAGAACG ACAAGAAGAA GGGATTCCCT AAAGGAAGTT TTATCGTACA CGTACGAGCT CCTTTCCTTG CAATACAAAG CGGTGAAGTA GGAGTAGGGC AAACCAAACG TATTGATTTA ATCAATATCT ATAACAATGC CTTTACTTTC GAAGGTGTAA ATAATGATAT TGCCACTGTT GAGTATGCAA GAGAATTAAG TGCAGGAACA GAAATTCCAA ATGGTAGCTT TACAGGTATA AAAGTAACAG GTAAAAAAGC AGGCTCTTTT GTGTTAAAGC TTATTAATAG CGATGGTGAT AACGGTAAAG GGAATGAAAT TAGCTTGACA ATCAATGTTA CTGCTGTTGA TAATTCCGCT TATATAATAA AAGACGGCGT ACTTACAGGA ATAAAAGCAG GTGTAAATTT AAAAGGAGCT ATAAAACTTC CTGAAAACGT TACAAAAGTA GCAGCTACAG TCTTTAAGAA TCAACCTGAG CTTACCGAGA TTGATTTTAA TAATGTTACT GAGATAGAAG GTAAAATATT TAGTGCAAAT GAAGATGATG TATTAGGTAT TAACGTTAAT CTTACTTCTA TTACATTGCC TAAAGTAGTA AAAATAGGAG ATTCCTCTTT TAGAAATGCT AAGAAATTAA CAAGAGTAGA ATTACCAGCT ACTTTAACTC ACTTAGGACA ATATGCATTC AGTAATTGTA CTGCGTTACA ACACGTAGCT TTTAGAGGAA CAGTTCCTCC AAAAGGATTA GGTGCTCTCC CTAAAACTAT TGTAAAAGGC AAACGTGAGC CAGCTCCAGA AAAACCTACC GCTACAGATG CTTTTGATGC TGGTCAGATA CAATTATATA TACCTTTAGC AAGTAAGTCA GCTTATAAAA ATGCTTTAGG AGAATCTCCT TTCCGTGCAG GAGGTATATA CAACCCTAAA GATATTTCAG AATTTAAATA A
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Protein sequence | MYLAMKTRLM MLALAVLTSA TLFSCKKDDK EGDSNIVLGK SAVTLNLGGQ ETIKVTAPDG IKKPQSEDVN VAIATVGRDI WVTIQSKQKV GETRVKIESK TGNIAYINVT VKDKETNDRG LVVLGKTVFV DRDQEVEVTN LLKKYNDVID KVNIKSTSSA LAQVRKDGNR FFVKGIGEGL TGEVYFEDTA GENDKKKGFP KGSFIVHVRA PFLAIQSGEV GVGQTKRIDL INIYNNAFTF EGVNNDIATV EYARELSAGT EIPNGSFTGI KVTGKKAGSF VLKLINSDGD NGKGNEISLT INVTAVDNSA YIIKDGVLTG IKAGVNLKGA IKLPENVTKV AATVFKNQPE LTEIDFNNVT EIEGKIFSAN EDDVLGINVN LTSITLPKVV KIGDSSFRNA KKLTRVELPA TLTHLGQYAF SNCTALQHVA FRGTVPPKGL GALPKTIVKG KREPAPEKPT ATDAFDAGQI QLYIPLASKS AYKNALGESP FRAGGIYNPK DISEFK
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