Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1306 |
Symbol | |
ID | 8367737 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1517539 |
End bp | 1518711 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644983733 |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003141413 |
Protein GI | 256820134 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATACGC TCTTTACTAT CGGCATTTTC CTTTGCTTTT TTCTTTCTGT ATTGCTCTTT ACCAAACGCC CTCAAGCCTT ATCGGATAAG GTATTGGGGA TATGGTTGGT GTGCATTGGT ATTTATCTGC TGAATTACTA CCTGCATTAT TTAGGCTATT GGGAGAAATA TCCTCATTTG GTAGGAGCGA CGCACCCTTT TCCGCTTTTG TTTGCTCCTT TTGTATATTT GTACGTGTTG GTGTGTTCAC GTGAAGACCA ACATTTTCAT TGGCGCGATA GCTTGCACTT TTTACCTTTT TTACTCACCT ACGTTGTGAT GTTTCCCTTT CTTTTTGGCT ATTCGGCGAC TGAAAAAGCA ATGATAGACC AAGCTGATTA CCATAGTCCC TATCAATGGT TATTTACAAC TTCGTTTGTA GCTTTTGTGA CCGTGAGTGT GGTGTATATT GTATTGGCTT ATCAGAAAAT CAATCAGTAT GAGCGGGTAA TAGGCGACAA TTTTGGCTAT AACGAAGGTA TTAGTTTGCA ATGGCTACGA CTGTTGCTCA TTGGGTTCGG GCTGATTTTC TCAGTGATGA TAGTGGGATA TATAGTGCAA TTTCTCTTAG AAATAGAGAT AGGAGTTAAT ATAGAACTTA TTTTCTTAAC ACTCTTTGTC TTACTTATAG GGCTTATTGG CTTCTGGGGC ATACGGCATC AGGGAATTTT TAGTGTTGAA AAACAAAAGC CTTTTATAAA GAATTTAGTC TTGTCTGACA ATTCTCATAG GTCAGACAAT ATTGAACCTT CTTCATTCTC CAAAACTCCT GAATACCGCA AATCTGGATT GAAAGCCGAG GACGCAACCA GCTTACACCA ACAGCTACTC ACACTAATGA CTACCGAAAA ACCTTATCTC GAACCTAAAC TCTCCTTAGC TCAATTAGCT GAAATGTTAG GTGTACTTCC TAATCACCTT TCACAAATTA TCAACCAATA CGAAGAAAAG AATTTTTATG ACTTTGTGAA TAGCTATCGT GTCGAAGAGT TTATCACTTT GGCAAAGAAA GACATTGATA AGAATTTTAA TCTTTTGGGG CTTGCCTATG AAGCGGGCTT TAACTCTAAG TCCTCTTTCA ATCAAGTGTT TAAGAAGATA ACAGGTAAAA CACCGAGTGA ATTTCTGAAT TAG
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Protein sequence | MNTLFTIGIF LCFFLSVLLF TKRPQALSDK VLGIWLVCIG IYLLNYYLHY LGYWEKYPHL VGATHPFPLL FAPFVYLYVL VCSREDQHFH WRDSLHFLPF LLTYVVMFPF LFGYSATEKA MIDQADYHSP YQWLFTTSFV AFVTVSVVYI VLAYQKINQY ERVIGDNFGY NEGISLQWLR LLLIGFGLIF SVMIVGYIVQ FLLEIEIGVN IELIFLTLFV LLIGLIGFWG IRHQGIFSVE KQKPFIKNLV LSDNSHRSDN IEPSSFSKTP EYRKSGLKAE DATSLHQQLL TLMTTEKPYL EPKLSLAQLA EMLGVLPNHL SQIINQYEEK NFYDFVNSYR VEEFITLAKK DIDKNFNLLG LAYEAGFNSK SSFNQVFKKI TGKTPSEFLN
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