Gene Coch_1226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_1226 
Symbol 
ID8367654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1433293 
End bp1433997 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content41% 
IMG OID644983655 
Productadenylylsulfate reductase, thioredoxin dependent 
Protein accessionYP_003141337 
Protein GI256820058 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin)
[TIGR02055] thioredoxin-dependent adenylylsulfate APS reductase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0928786 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGAAC GATTAACAAC ATTACATAAC GCTCTCTTAC AAAAAACAGA AGTAGAAGGT 
CTCGCTTCTT TAGCTGAACA ATTTCCTAAT GAGATAGTTT TTTCAACCAG CTTTGGGTTA
GAAGACCAAG CTATTACTCA CCTCATTCTC GCAAACCAAA TTCCTATCAG TATTTTCACT
TTAGATACCG GTCGCTTGTT CAACGAAACT TACTCAGTTT GGGAAAGCAC TGAGCAACGC
TACAATACAC ATATTTTGCC TTATTATCCC AAAACACACG ATATAGAAGA ATATGTACAC
AAAAATGGCC CTTTGTCTTT TTATCGCTCA GTAGAGCTGC GCAAAGAGTG CTGTCATATA
CGCAAAGTAG AACCCCTTAG CCGAGCACTA AAAGGCAAGA AAGTATGGGT AACAGGTTTA
CGTGCCGACC AAAGTAATGC TCGTAAAGAC CTCCCTATAC TCGAATGGGA CGATACTTAC
CAGCTCTTTA AATACAGCCC TATCCTCCAT TGGACGTTTG AAGATACCAA AGCCTTTATC
AAGGCACATA ACATTCCTTA TAATGTGTTA CACGACAAAG GTTTTGTGAG CATAGGCTGT
GCCCCTTGTA CTCGTGCTAT CAAAGAGGGT GAAGATTTTC GCGCAGGTCG TTGGTGGTGG
GAAAGCAATA GTAAAAAAGA ATGCGGACTA CACGAACACA AATAA
 
Protein sequence
MKERLTTLHN ALLQKTEVEG LASLAEQFPN EIVFSTSFGL EDQAITHLIL ANQIPISIFT 
LDTGRLFNET YSVWESTEQR YNTHILPYYP KTHDIEEYVH KNGPLSFYRS VELRKECCHI
RKVEPLSRAL KGKKVWVTGL RADQSNARKD LPILEWDDTY QLFKYSPILH WTFEDTKAFI
KAHNIPYNVL HDKGFVSIGC APCTRAIKEG EDFRAGRWWW ESNSKKECGL HEHK