Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Coch_1100 |
Symbol | |
ID | 8367522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Capnocytophaga ochracea DSM 7271 |
Kingdom | Bacteria |
Replicon accession | NC_013162 |
Strand | + |
Start bp | 1300976 |
End bp | 1301593 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644983528 |
Product | cytochrome c nitrate reductase, small subunit |
Protein accession | YP_003141216 |
Protein GI | 256819937 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | [TIGR03153] cytochrome c nitrate reductase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGACAA CAGATAACAA CACCCCATCT ACTAAAAAAG GACGATGGTT TCGTTTCTTA ATTCCCTCGT TAGTAGGGAT ACTGATAGGG CTTTGCGGGT ATATTTTCTA TATATCCAAA GCATATACCT ATCTGTCTGA CGACCCCAAG GCGTGTGTGA ACTGCCATAT TATGGAGCCT GAGTACGCTA CGTGGATGCA CTCCTCTCAC GGCCGAAATA CCGTGTGTAA CGATTGCCAC GTGCCTCACG ACAACGTTTT TCGCAAATAT TATTTTAAAG CGAACGACGG TCTGCGTCAC GCCACGATGT TTACCTTCCG TATGGAACCA CAAGTGATTA AGATGCACTC TCCAGGGCAA AGAGTAGTAC AAGAAAATTG TATTCGTTGC CACAGCACCC TTGTAAGCGA AGTGCAAGCA GGCAAGGTAA CTGCTGAAAT GGCACACGCC GATAATGGCA AATTGTGCTG GGATTGCCAC CGCGAAGTAC CTCACAGCCG TGTGAGAGGG CTTAATGCTG CTCCTCATTC GCCTGTGCCT ATTGTGGACA ATATGCCGAG CAACACTCCC GATTGGCTTG ACAAAATGGT GAAAAACAGA GAAAAATCAA ATAATTAA
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Protein sequence | MATTDNNTPS TKKGRWFRFL IPSLVGILIG LCGYIFYISK AYTYLSDDPK ACVNCHIMEP EYATWMHSSH GRNTVCNDCH VPHDNVFRKY YFKANDGLRH ATMFTFRMEP QVIKMHSPGQ RVVQENCIRC HSTLVSEVQA GKVTAEMAHA DNGKLCWDCH REVPHSRVRG LNAAPHSPVP IVDNMPSNTP DWLDKMVKNR EKSNN
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