| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_1048 |
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| Symbol | |
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| ID | 8367470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Capnocytophaga ochracea DSM 7271 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013162 |
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| Strand | + |
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| Start bp | 1247174 |
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| End bp | 1247908 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644983476 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003141164 |
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| Protein GI | 256819885 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAGT ATGCTATTAT TACAGGTGGT TCGCGAGGTA TAGGGCGTGC TATATGCGAA
AAACTCGCAC AAGACACCGA TTATCATTTA CTCATTGCTT ACCAAAGCAA TGAGGTTGCT
GCACTTGAAA CCCTCAATCA CATCAAGAAA TTAGGACGTG AAGGAGAGAT TATACGCTTT
GACGTATCTG ACCACCAAAG TACTACCGAA GCCCTTACCA AATGGCAACA CGACAATAAA
GATGCCGTGG TAGAAGTGAT TGTGAACAAC GCGGGTATTA ACCGCGATGG ACTCTTTATG
TGGATGCCCC AAGAGGATTG GAGCAAAGTG ATTTCCACTA CTCTCGACGG CTTCTACAAT
GTAACTAATT TCTTTATCCA AAAGATGCTA CGCCATCGTT ATGGACGTAT TATCAACATC
TCATCGGTAT CGGGGGTGAA GGGAACCGCA GGACAAACCA ACTATTCGGC TGCCAAAGGC
GCGATTATTG CGGCTACCAA AGCCTTGGCG CAAGAAGTAG CCAAAAGACA CATTACCGTG
AATGCCATTG CTCCTGGGTT TATCCGCACT GATATGACCT CTTCGCTCAA CGAAGAAGAC
CTCGTGAAAC TTATACCGGT AGGTCGTTTT GGGGAAGCCG AAGAAGTAGC TGACCTCGTA
TCGTTTTTAG TCTCTAAAAA AGCTTCGTAT ATCACCGGAG AAGTGATTAA TATCAACGGG
GGAGTGTATA GTTAG
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| Protein sequence | MRKYAIITGG SRGIGRAICE KLAQDTDYHL LIAYQSNEVA ALETLNHIKK LGREGEIIRF
DVSDHQSTTE ALTKWQHDNK DAVVEVIVNN AGINRDGLFM WMPQEDWSKV ISTTLDGFYN
VTNFFIQKML RHRYGRIINI SSVSGVKGTA GQTNYSAAKG AIIAATKALA QEVAKRHITV
NAIAPGFIRT DMTSSLNEED LVKLIPVGRF GEAEEVADLV SFLVSKKASY ITGEVINING
GVYS
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