| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Coch_0986 |
|---|
| Symbol | |
|---|
| ID | 8367405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Capnocytophaga ochracea DSM 7271 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013162 |
|---|
| Strand | - |
|---|
| Start bp | 1154170 |
|---|
| End bp | 1155459 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644983411 |
|---|
| Product | glycosyl transferase group 1 |
|---|
| Protein accession | YP_003141102 |
|---|
| Protein GI | 256819823 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.32714 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAG CAAGAGTATT AATGTTTGGA TGGGAATTTC CCCCTCATAT CAGTGGGGGA
TTAGGAACAG CCTGCTTGGG TATTGCCCAA GGATTGGCTA AAAACGGCGT AAAAGTGCTG
TTTGTGATGC CAAAAGCCTC CGGTGATGAA GACGGCAATG TGGCTAAGAT TATCAACGCT
AGCGATGTAG AGATGTTGCA AAACGCTGAA AAGATTGAAG ATTTCTGGAA ACACATCAAT
TTTATGGAGA TAGGTTCGAA CCTCGTGCCT TACCTGGACC CCGAAACCTT TGCCCGTGAA
CGTGATGCTT ACCTCAAAGA AGGCGAACAC CGCGAGCGCA TTTCGTATCA TAACAAATTT
CAGTTTTCGG GCAAATACGG TGCAAATCTG ATGGAAGAGG TCTACCGCTA CGCCTTAGTA
GCGGGCACAG TTGCCCAACG CTATGAGTTC GACGTGATTC ACGCCCACGA CTGGCTTACC
TATAGTGCGG GTATCATCGC CAAGAAGATT TCGGGCAAAC CCCTTATCGT ACACGTACAC
GCTACCGAGT ACGACCGTGG GGGCGAGTAT AACCGCAATA CATTGGTCTA CGATATCGAA
AAACGCGGTA TGGAAGCTGC CGATAGGGTA GTAACCGTGA GCAACTGGAC GCGCAATATC
GTCATTGAAA AATACGGTAT CCCTGCCGAG AAGGTGATTA CTGTGCACAA TGCAGTAGAC
TTTAAAGCCG AAACTGATGC CAAAGAAGAA CGCGGTATTA AGGATAAAAT CGTTACTTTC
TTAGGGCGTA TCACCTTGCA AAAAGGTCCT GAATATTTCG TCGAGGCAGC TGCAAAAGTG
ATGAAACGTA TGCCTAACGT ACGCTTTGTA ATGGCAGGTA GTGGCGAGAA GATGAACCCC
TTAGTGCGCC GTGTTGCACA ATTGGGATTA GGAACCCGCT TCCACTTCAC AGGTTTTCTC
AGGGGCAACG ACGTACAGCG TATGTTCCAA TACAGCGATG TGTATGTGAT GCCCTCAGTA
TCCGAGCCTT TTGGGATTTC TCCTTTGGAA GCAATGCGCT CAGGAGTACC TACTATCATC
TCCAAACAAT CGGGAGTGGC TGAGGTACTC CACCACGCTA TCAAAGTAGA CTATTGGGAT
ATCAACGCCC TTGCCGATGC TATTTATGGT ATTTTGGCTT ACCCCACCCT CGCTCACTAT
ATGCAACGTG AAGGGTACGA CGAGGTAAAC CAACTGAAAT GGGAAAAAGC TTCCTTGAAA
CTCAAAAACA TTTACGAATC TTTAATATAA
|
|---|
| Protein sequence | MKKARVLMFG WEFPPHISGG LGTACLGIAQ GLAKNGVKVL FVMPKASGDE DGNVAKIINA
SDVEMLQNAE KIEDFWKHIN FMEIGSNLVP YLDPETFARE RDAYLKEGEH RERISYHNKF
QFSGKYGANL MEEVYRYALV AGTVAQRYEF DVIHAHDWLT YSAGIIAKKI SGKPLIVHVH
ATEYDRGGEY NRNTLVYDIE KRGMEAADRV VTVSNWTRNI VIEKYGIPAE KVITVHNAVD
FKAETDAKEE RGIKDKIVTF LGRITLQKGP EYFVEAAAKV MKRMPNVRFV MAGSGEKMNP
LVRRVAQLGL GTRFHFTGFL RGNDVQRMFQ YSDVYVMPSV SEPFGISPLE AMRSGVPTII
SKQSGVAEVL HHAIKVDYWD INALADAIYG ILAYPTLAHY MQREGYDEVN QLKWEKASLK
LKNIYESLI
|
|---|
| |