Gene Coch_0946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCoch_0946 
Symbol 
ID8367365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCapnocytophaga ochracea DSM 7271 
KingdomBacteria 
Replicon accessionNC_013162 
Strand
Start bp1102626 
End bp1103453 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content38% 
IMG OID644983371 
Producthypothetical protein 
Protein accessionYP_003141062 
Protein GI256819783 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAT TAGGAAATTT GAGAATGAGA AAGGTTTTAT TATTAGCTCT TATAGGGATT 
GCTTTGGTGG GCTGTCGGAA GAGTGATGAT GACAACAACG GTAACTCCAC TGCTGATTAT
GAGCTCAGCG CTGATGGGCG TACACTCATA AAATGGAAAA ATGCAAATAC TACGGTGCTT
GATATGCAAG CTGACGAGAA GCTCAGAAAT GTGAACACTA TCGGGAAAGA GGCTTTTAAA
GAACATCAGA ACTTACAGTC GATTACATTC CCGAATAACC TGAAAGAGAT AGAAGAGGGT
GCTTTTGAAG AAGCTAGCCT TAGTGGTACC GTTACCTTCA ATACCAATGC TACAGTAGTT
TTTGGCGATA AAGCTTTCTT CAAAACAAAA ATTAGAAAAC TCTCCCTTCC TAATGTAAAA
AGACTGCCCT ATAGCGTATT GTCAATGTCT TATAATCTCG AAGAATTACA CTTCAATAAA
TTAGAAATAT TAGGATTTGG CGCTATTGGG TGGAATTATC TAAAAGAAAT TAACTTAGAA
AATACAGGAC TCACTGATAT AGAAACTGTG GGAATTTCGG GGTGTACGGA GATGAAGAGT
GTTGTCTTGC CTGCAACACT GAAGACTATA GGGTATGATG CTTTTTGGTA TTGCCAACAG
CTTAAAACAG TAACGATTAA TGCGGTAAAC CCTCCTGCCT TAGTGAATAA CCCGTTTAGG
GCTACTCGTA TAGAAAAGAT ATACGTACCT AAAGGCTCGG TAGAGCAATA CAAAAGAGCT
ACTTTCTGGA GTGCTTTTTC TGATAAGATA TATCCGAAAG CACAATAA
 
Protein sequence
MRKLGNLRMR KVLLLALIGI ALVGCRKSDD DNNGNSTADY ELSADGRTLI KWKNANTTVL 
DMQADEKLRN VNTIGKEAFK EHQNLQSITF PNNLKEIEEG AFEEASLSGT VTFNTNATVV
FGDKAFFKTK IRKLSLPNVK RLPYSVLSMS YNLEELHFNK LEILGFGAIG WNYLKEINLE
NTGLTDIETV GISGCTEMKS VVLPATLKTI GYDAFWYCQQ LKTVTINAVN PPALVNNPFR
ATRIEKIYVP KGSVEQYKRA TFWSAFSDKI YPKAQ